Publications

2019

  • Brehmer, K., Aggrawal, H. O., Heldmann, S. and Modersitzki, J.: Variational registration of multiple images with the SVD based SqN distance measure in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings, pp. 251-262, Springer International Publishing, 2019
    BibTeX Link Link
    @inproceedings{Brehmer2019,
    author={Brehmer, Kai and Aggrawal, Hari Om and Heldmann, Stefan and Modersitzki, Jan},
    title={Variational registration of multiple images with the SVD based SqN distance measure},
    booktitle={Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings},
    year={2019},
    editor={Burger, Martin and Lellmann, Jan and Modersitzki, Jan},
    publisher={Springer International Publishing},
    pages={251--262},
    url={{{https://arxiv.org/abs/1907.09732}}},
    doi={{{10.1007/978-3-030-22368-7_20}}}
    }
  • Wacker, B.: Two variants of magnetic diffusivity stabilized finite element methods for the magnetic induction equation Mathematical Methods in the Applied Sciences, ley Online Library, 2019
    BibTeX
    @article{Wacker2019,
      title={Two variants of magnetic diffusivity stabilized finite element methods for the magnetic induction equation},
      author={Wacker, Benjamin},
      journal={Mathematical Methods in the Applied Sciences},
      year={2019},
      publisher={Wiley Online Library}
    }
  • Jäckle, S., Strehlow, J. and Heldmann, S.: Shape Sensing with Fiber Bragg Grating Sensors in Bildverarbeitung für die Medizin 2019, pp. 258-263, Springer, 2019
    BibTeX Link
    @incollection{jaeckle2019shape,
      title={Shape Sensing with Fiber Bragg Grating Sensors},
      author={J{\"a}ckle, Sonja and Strehlow, Jan and Heldmann, Stefan},
      booktitle={Bildverarbeitung f{\"u}r die Medizin 2019},
      pages={258--263},
      year={2019},
      publisher={Springer},
      url={https://link.springer.com/chapter/10.1007%2F978-3-658-25326-4_58},
    }
  • Vogt, T., Strekalovskiy, E., Cremers, D. and Lellmann, J.: Lifting methods for manifold-valued variational problems in Variational Methods for Nonlinear Geometric Data and Applications, pp. In press, Springer International Publishing, Springer Handbooks, 2019
    BibTeX Link Link
    @incollection{VogtEtAl2019,
    author={Vogt, Thomas and Strekalovskiy, Evgeny and Cremers, Daniel and Lellmann, Jan},
    title={Lifting methods for manifold-valued variational problems},
    series={Springer Handbooks},
    booktitle={Variational Methods for Nonlinear Geometric Data and Applications},
    editor={Grohs, Philipp and Holler, Martin and Weinmann, Andreas},
    publisher={Springer International Publishing},
    pages={In press},
    year={2019},
    url={{{https://arxiv.org/pdf/1908.03776.pdf}}},
    doi={{{10.1007/tba}}}
    }
  • Vogt, T. and Lellmann, J.: Functional Liftings of Vectorial Variational Problems with Laplacian Regularization in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings, pp. 559-571, Springer International Publishing, 2019
    BibTeX Link Link
    @inproceedings{VogtLellmann2019,
    author={Vogt, Thomas and Lellmann, Jan},
    title={Functional Liftings of Vectorial Variational Problems with Laplacian Regularization},
    booktitle={Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings},
    year={2019},
    editor={Burger, Martin and Lellmann, Jan and Modersitzki, Jan},
    publisher={Springer International Publishing},
    pages={559--571},
    url={{{https://arxiv.org/pdf/1904.00898.pdf}}},
    doi={{{10.1007/978-3-030-22368-7_44}}}
    }

2018

  • Brehmer, K., Wacker, B. and Modersitzki, J.: Simultaneous Registration of Image Sequences-a novel singular value based images similarity measure PAMM, vol. 18, no. 1, pp. e201800370, Wiley Online Library, 2018
    BibTeX Link Link
    @article{brehmer2018simultaneous,
      title={Simultaneous Registration of Image Sequences--a novel singular value based images similarity measure},
      author={Brehmer, Kai and Wacker, Benjamin and Modersitzki, Jan},
      journal={PAMM},
      volume={18},
      number={1},
      pages={e201800370},
      year={2018},
      publisher={Wiley Online Library},
      url={{{https://arxiv.org/abs/1907.09275}}},
      doi={{{10.1002/pamm.201800370}}}
    }
  • Jäckle, S. and Heldmann, S.: Rigid Lens-Locally Rigid Approximations of Deformable Registration for Change Assessment in Thorax-Abdomen CT Follow-Up Scans in Image Analysis for Moving Organ, Breast, and Thoracic Images, pp. 272-283, Springer, 2018
    BibTeX Link
    @incollection{jaeckle2018rigid,
      title={Rigid Lens--Locally Rigid Approximations of Deformable Registration for Change Assessment in Thorax-Abdomen CT Follow-Up Scans},
      author={J{\"a}ckle, Sonja and Heldmann, Stefan},
      booktitle={Image Analysis for Moving Organ, Breast, and Thoracic Images},
      pages={272--283},
      year={2018},
      publisher={Springer},
      url={https://link.springer.com/chapter/10.1007/978-3-030-00946-5_27},
    }
  • García-Vázquez, V., von Haxthausen, F., Jäckle, S., Schumann, C., Kuhlemann, I., Bouchagiar, J., Höfer, A., Matysiak, F., Hüttmann, G., Goltz, J. P. and thers, .: Navigation and visualisation with HoloLens in endovascular aortic repair Innovative Surgical Sciences, vol. 3, no. 3, pp. 167-177, De Gruyter, 2018
    BibTeX Link
    @article{garcia2018navigation,
      title={Navigation and visualisation with HoloLens in endovascular aortic repair},
      author={Garc{\'i}a-V{\'a}zquez, Ver{\'o}nica and von Haxthausen, Felix and J{\"a}ckle, Sonja and Schumann, Christian and Kuhlemann, Ivo and Bouchagiar, Juljan and H{\"o}fer, Anna-Catharina and Matysiak, Florian and H{\"u}ttmann, Gereon and Goltz, Jan Peter and others},
      journal={Innovative Surgical Sciences},
      volume={3},
      number={3},
      pages={167--177},
      year={2018},
      publisher={De Gruyter},
      url={https://degruyter.com/downloadpdf/j/iss.2018.3.issue-3/iss-2018-2001/iss-2018-2001.pdf}
    }
  • Vogt, T. and Lellmann, J.: Measure-Valued Variational Models with Applications to Diffusion-Weighted Imaging, Journal of Mathematical Imaging and Vision,, Springer International Publishing, Jun,, 2018
    BibTeX Link Link Datei
    @article{VogtLellmann2018,
    author ={Vogt, T. and Lellmann, J.},
    publisher={Springer International Publishing},
    title={Measure-Valued Variational Models with Applications to Diffusion-Weighted Imaging},
    journal={Journal of Mathematical Imaging and Vision},
    year={2018},
    month={Jun},
    day={08},
    issn={1573-7683},
    doi={10.1007/s10851-018-0827-8},
    url={https://arxiv.org/pdf/1710.00798.pdf}
    }
  • König, L.: Matrix-free approaches for deformable image registration with large-scale and real-time applications in medical imaging 2018
    BibTeX Datei
    @phdthesis{2018-PhD-Konig,
      Author = {Lars König},
      Title = {Matrix-free approaches for deformable image registration with large-scale and real-time applications in medical imaging},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2018},
    }
  • Polzin, T.: Large Deformation Diffeomorphic Metric Mappings - Theory, Numerics, and Applications 2018
    BibTeX
    @phdthesis{2018-PhD-Polzin,
      Author = {Thomas Polzin},
      Title = {Large Deformation Diffeomorphic Metric Mappings -- Theory, Numerics, and Applications},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2018},
    }
  • Loewenhauser, B. and Lellmann, J.: Functional Lifting for Variational Problems with Higher-Order Imaging, Vision and Learning Based on Optimization and PDEs: IVLOPDE, Bergen, Norway, August 29-September 2, 2016, pp. 101, ringer, 2018
    BibTeX
    @article{loewenhauser2018functional,
      title={Functional Lifting for Variational Problems with Higher-Order},
      author={Loewenhauser, Benedikt and Lellmann, Jan},
      journal={Imaging, Vision and Learning Based on Optimization and PDEs: IVLOPDE, Bergen, Norway, August 29--September 2, 2016},
      pages={101},
      year={2018},
      publisher={Springer},
      URL={https://link.springer.com/chapter/10.1007%2F978-3-319-91274-5_5}
    }
  • Hanson, E. A., Sandmann, C., Malyshev, A., Lundervold, A., Modersitzki, J. and Hodneland, E.: Estimating the discretization dependent accuracy of perfusion in coupled capillary flow measurements PloS one, vol. 13, no. 7, pp. e0200521, blic Library of Science, 2018
    BibTeX
    @article{hanson2018estimating,
      title={Estimating the discretization dependent accuracy of perfusion in coupled capillary flow measurements},
      author={Hanson, Erik A and Sandmann, Constantin and Malyshev, Alexander and Lundervold, Arvid and Modersitzki, Jan and Hodneland, Erlend},
      journal={PloS one},
      volume={13},
      number={7},
      pages={e0200521},
      year={2018},
      publisher={Public Library of Science}
    }
  • Mader, A. O., Lorenz, C., Bergtholdt, M., von Berg, J., Schramm, H., Modersitzki, J. and Meyer, C.: Detection and localization of spatially correlated point landmarks in medical images using an automatically learned conditional random field Computer Vision and Image Understanding, vol. 176, pp. 45-53, sevier, 2018
    BibTeX
    @article{mader2018detection,
      title={Detection and localization of spatially correlated point landmarks in medical images using an automatically learned conditional random field},
      author={Mader, Alexander Oliver and Lorenz, Cristian and Bergtholdt, Martin and von Berg, Jens and Schramm, Hauke and Modersitzki, Jan and Meyer, Carsten},
      journal={Computer Vision and Image Understanding},
      volume={176},
      pages={45--53},
      year={2018},
      publisher={Elsevier}
    }
  • Brehmer, K., Wacker, B. and Modersitzki, J.: A Novel Similarity Measure for Image Sequences in International Workshop on Biomedical Image Registration, pp. 47-56, 2018
    BibTeX Link Link
    @inproceedings{brehmer2018novel,
      title={A Novel Similarity Measure for Image Sequences},
      author={Brehmer, Kai and Wacker, Benjamin and Modersitzki, Jan},
      booktitle={International Workshop on Biomedical Image Registration},
      pages={47--56},
      year={2018},
      organization={Springer},
      url={{{https://arxiv.org/abs/1907.09741}}},
      doi={{{10.1007/978-3-319-92258-4_5}}}
    }
  • König, L., Rühaak, J., Derksen, A. and Lellmann, J.: A matrix-free approach to parallel and memory-efficient deformable image registration SIAM Journal on Scientific Computing, vol. 40, no. 3, pp. B858-B888, 2018
    BibTeX Link Link Datei
    @article{konig2018matrix,
    author = {König, Lars and Rühaak, Jan and Derksen, Alexander and Lellmann, Jan},
    journal = {SIAM Journal on Scientific Computing},
    title = {A matrix-free approach to parallel and memory-efficient deformable image registration},
    year = {2018},
    volume = {40},
    number = {3},
    pages = {B858--B888},
    url = {https://arxiv.org/abs/1804.10541},
    doi = {10.1137/17M1125522}
    }

2017

  • Korolev, Y. and Lellmann, J.: Image reconstruction with imperfect forward models and applications in deblurring no. arXiv:1708.01244, 2017
    BibTeX Link Auszeichnung
    @TechReport{KorolevLellmann2017,
      author =      {Korolev, Y. and Lellmann, J.},
      title =       {Image reconstruction with imperfect forward models and applications in deblurring},
      institution = {University of Luebeck},
      year =        {2017},
      type =        {Preprint},
      number =      {arXiv:1708.01244},
      url =         {https://arxiv.org/abs/1708.01244}
    }
  • Rühaak, J., Polzin, T., Heldmann, S., Simpson, I. J. A., Handels, H., Modersitzki, J. and Heinrich, M. P.: Estimation of Large Motion in Lung CT by Integrating Regularized Keypoint Correspondences into Dense Deformable Registration IEEE Transactions on Medical Imaging, vol. 36, no. 8, pp. 1746-1757, IEEE, 2017
    BibTeX
    @article{ruhaak2017estimation,
      title={Estimation of Large Motion in Lung CT by Integrating Regularized Keypoint Correspondences into Dense Deformable Registration},
      author={R{\"u}haak, Jan and Polzin, Thomas and Heldmann, Stefan and Simpson, Ivor J. A. and Handels, Heinz and Modersitzki, Jan and Heinrich, Mattias P.},
      journal={IEEE Transactions on Medical Imaging},
      volume = {36},
      number = {8},
      pages = {1746--1757},
      year={2017},
      publisher={IEEE}
    }
  • Sandmann, C. M.: Dynamic Models and Coupling in Medical 4D Imaging 2017
    BibTeX
    @phdthesis{2017-PhD-Sandmann,
      Author = {Constantin M. Sandmann},
      Title = {Dynamic Models and Coupling in Medical 4D Imaging},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2017},
    }
  • Mader, A. O., Lorenz, C., Bergtholdt, M., von Berg, J., Schramm, H., Modersitzki, J. and Meyer, C.: Detection and Localization of Landmarks in the Lower Extremities Using an Automatically Learned Conditional Random Field in Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics, pp. 64-75, ringer, 2017
    BibTeX
    @incollection{mader2017detection,
      title={Detection and Localization of Landmarks in the Lower Extremities Using an Automatically Learned Conditional Random Field},
      author={Mader, Alexander Oliver and Lorenz, Cristian and Bergtholdt, Martin and von Berg, Jens and Schramm, Hauke and Modersitzki, Jan and Meyer, Carsten},
      booktitle={Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics},
      pages={64--75},
      year={2017},
      publisher={Springer}
    }
  • Vogt, T. and Lellmann, J.: An Optimal Transport-Based Restoration Method for Q-Ball Imaging in Scale Space and Variational Methods in Computer Vision: 6th International Conference, SSVM 2017, Kolding, Denmark, June 4-8, 2017, Proceedings, pp. 271-282, Springer International Publishing, 2017
    BibTeX Link Datei
    @INPROCEEDINGS{vogt2017qball,
    author={Vogt, Thomas and Lellmann, Jan},
    title={An Optimal Transport-Based Restoration Method for Q-Ball Imaging},
    booktitle={Scale Space and Variational Methods in Computer Vision: 6th International Conference, SSVM 2017, Kolding, Denmark, June 4-8, 2017, Proceedings},
    pages={271--282},
    year={2017},
    publisher={Springer International Publishing},
    editor={Lauze, Fran{\c{c}}ois and Dong, Yiqiu and Dahl, Anders Bjorholm},
    doi={{{10.1007/978-3-319-58771-4_22}}}
    }
  • Ruthotto, L., Greif, C. and Modersitzki, J.: A stabilized multigrid solver for hyperelastic image registration Numerical Linear Algebra with Applications, vol. 24, no. 5, pp. e2095, ley Online Library, 2017
    BibTeX
    @article{ruthotto2017stabilized,
      title={A stabilized multigrid solver for hyperelastic image registration},
      author={Ruthotto, Lars and Greif, Chen and Modersitzki, Jan},
      journal={Numerical Linear Algebra with Applications},
      volume={24},
      number={5},
      pages={e2095},
      year={2017},
      publisher={Wiley Online Library}
    }
  • Rust, C., Häger, S., Traulsen, N. and Modersitzki, J.: A robust algorithm for optic disc segmentation and fovea detection in retinal fundus images Current Directions in Biomedical Engineering, vol. 3, no. 2, pp. 533-537, Gruyter, 2017
    BibTeX
    @article{rust3robust,
      title={A robust algorithm for optic disc segmentation and fovea detection in retinal fundus images},
      author={Rust, Caterina and H{\"a}ger, Stephanie and Traulsen, Nadine and Modersitzki, Jan},
      journal={Current Directions in Biomedical Engineering},
      volume={3},
      number={2},
      year={2017},
      pages={533--537},
      publisher={De Gruyter}
    }
  • Rühaak, J., König, L., Tramnitzke, F., Köstler, H. and Modersitzki, J.: A Matrix-Free Approach to Efficient Affine-Linear Image Registration on CPU and GPU Journal of Real-Time Image Processing, vol. 13, no. 1, pp. 205-225, Springer, 2017
    BibTeX Link Datei
    @ARTICLE{ruhaak2017matrix,
      author = {R\"{u}haak, Jan and K\"{o}nig, Lars and Tramnitzke, Florian and K\"{o}stler, Harald and Modersitzki, Jan},
      title = {A {M}atrix-{F}ree {A}pproach to {E}fficient {A}ffine-{L}inear {I}mage {R}egistration on {CPU} and {GPU}},
      journal = {{J}ournal of {R}eal-{T}ime {I}mage {P}rocessing},
      year      = {2017},
      volume    = {13},
      number    = {1},
      pages     = {205--225},
      issn      = {1861-8219},
      publisher = {Springer},
      url = {http://dx.doi.org/10.1007/s11554-016-0564-4}
    }

2016

  • Möllenhoff, T., Laude, E., Möller, M., Lellmann, J. and Cremers, D.: Sublabel-Accurate Relaxation of Nonconvex Energies in Proc. IEEE Conf. Comp. Vis. Patt. Recogn., 2016
    BibTeX Auszeichnung
    @InProceedings{Moellenhoff2016,
      author =    {M{\"o}llenhoff, T. and Laude, E. and M{\"o}ller, M. and Lellmann, J. and Cremers, D.},
      title =     {Sublabel-Accurate Relaxation of Nonconvex Energies},
      booktitle = {Proc. IEEE Conf. Comp. Vis. Patt. Recogn.},
      year =      {2016}
    }
  • Laude, E., Möllenhoff, T., Möller, M., Lellmann, J. and Cremers, D.: Sublabel-Accurate Convex Relaxation of Vectorial Multilabel Energies in Proc. Europ. Conf. Comp. Vision, 2016
    BibTeX
    @InProceedings{Laude2016,
      author = {Laude, E. and M{\"o}llenhoff, T. and M{\"o}ller, M. and Lellmann, J and Cremers, D.},
      title =  {Sublabel-Accurate Convex Relaxation of Vectorial Multilabel Energies},
      year =   {2016},
      booktitle  = {Proc. Europ. Conf. Comp. Vision}
    }
  • Polzin, T., Niethammer, M., Heinrich, M. P., Handels, H. and Modersitzki, J.: Memory Efficient LDDMM for Lung CT in Medical Image Computing and Computer-Assisted Intervention 2016, pp. 28-36, Springer, 2016
    BibTeX Datei Poster Abstract
    @INPROCEEDINGS{PolzinEtAl2016,
      author = {Polzin, Thomas and Niethammer, Marc and Heinrich, Mattias Paul and
    	Handels, Heinz and Modersitzki, Jan},
      title = {{Memory Efficient LDDMM for Lung CT}},
      booktitle = {Medical Image Computing and Computer-Assisted Intervention 2016},
      pages = {28--36},
      year = {2016},
      publisher = {Springer},
     editor = {Sebastién Ourselin and Leo Joskowicz and Mert R. Sabuncu and Gozde Unal and William Wells}
    }
  • Lotz, J. M., Hoffmann, F., Lotz, J., Heldmann, S., Trede, D., Oetjen, J., Becker, M., Ernst, G., Maas, P., Alexandrov, T., Guntinas-Lichius, O., Thiele, H. and von Eggeling, F.: Integration of 3D multimodal imaging data of a head and neck cancer and advanced feature recognition Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, Elsevier B.V., 2016
    BibTeX Link
    @article{Lotz2016Integration,
    abstract = {In the last years, matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI MSI) became an imaging technique which has the potential to characterize complex tumor tissue. The combination with other modalities and with standard histology techniques was achieved by the use of image registration methods and enhances analysis possibilities. We analyzed an oral squamous cell carcinoma with up to 162 consecutive sections with MALDI MSI, hematoxylin and eosin (H{\&}E) staining and immunohistochemistry (IHC) against CD31. Spatial segmentation maps of the MALDI MSI data were generated by similarity-based clustering of spectra. Next, the maps were overlaid with the H{\&}E microscopy images and the results were interpreted by an experienced pathologist. Image registration was used to fuse both modalities and to build a three-dimensional (3D) model. To visualize structures below resolution of MALDI MSI, IHC was carried out for CD31 and results were embedded additionally. The integration of 3D MALDI MSI data with H{\&}E and IHC images allows a correlation between histological and molecular information leading to a better understanding of the functional heterogeneity of tumors. This article is part of a Special Issue entitled: MALDI Imaging, edited by Dr. Corinna Henkel and Prof. Peter Hoffmann.},
    author = {Lotz, Judith M. and Hoffmann, Franziska and Lotz, Johannes and Heldmann, Stefan and Trede, Dennis and Oetjen, Janina and Becker, Michael and Ernst, G{\"{u}}nther and Maas, Peter and Alexandrov, Theodore and Guntinas-Lichius, Orlando and Thiele, Herbert and von Eggeling, Ferdinand},
    doi = {10.1016/j.bbapap.2016.08.018},
    issn = {15709639},
    journal = {Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics},
    keywords = {3D,Head and Neck Cancer,MALDI imaging,OSCC,image registration,immunohistochemistry,multimodality},
    pmid = {27594533},
    publisher = {Elsevier B.V.},
    title = {{Integration of 3D multimodal imaging data of a head and neck cancer and advanced feature recognition}},
    year = {2016}
    }
    
  • Lee, J., Cai, X., Lellmann, J., Dalponte, M., Malhi, Y., Butt, N., Morecroft, M., Schönlieb, C. and Coomes, D.: Individual Tree Species Classification From Airborne Multisensor Imagery Using Robust PCA Appl. Earth Obs. Remote Sensing, 2016
    BibTeX
    @Article{LeeCaiLellmannEtAl2016,
      author =  {Lee, J. and Cai, X. and Lellmann, J. and Dalponte, M. and Malhi, Y. and Butt, N. and Morecroft, M. and Schönlieb, C.-B. and Coomes, D.},
      title =   {Individual Tree Species Classification From Airborne Multisensor Imagery Using Robust {PCA}},
      journal = {Appl. Earth Obs. Remote Sensing},
      year =    {2016},
      note =    {In Press.}
    }
  • Stützer, K., Haase, R., Lohaus, F., Barczyk, S., Exner, F., Löck, S., Rühaak, J., Lassen-Schmidt, B., Corr, D. and Richter, C.: Evaluation of a deformable registration algorithm for subsequent lung computed tomography imaging during radiochemotherapy Medical Physics, vol. 43, no. 9, pp. 5028-5039, Wiley Online Library, 2016
    BibTeX
    @article{stutzer2016evaluation,
      title={Evaluation of a deformable registration algorithm for subsequent lung computed tomography imaging during radiochemotherapy},
      author={St{\"u}tzer, Kristin and Haase, Robert and Lohaus, Fabian and Barczyk, Steffen and Exner, Florian and L{\"o}ck, Steffen and R{\"u}haak, Jan and Lassen-Schmidt, Bianca and Corr, D{\"o}rte and Richter, Christian},
      journal={Medical Physics},
      volume={43},
      number={9},
      pages={5028--5039},
      year={2016},
      publisher={Wiley Online Library}
    }
    
  • König, L., Derksen, A., Papenberg, N. and Haas, B.: Deformable image registration for adaptive radiotherapy with guaranteed local rigidity constraints Radiation Oncology, vol. 11, no. 1, pp. 122, BioMed Central, 2016
    BibTeX Link Datei Abstract
    @article{konig2016deformable,
      title={Deformable image registration for adaptive radiotherapy with guaranteed local rigidity constraints},
      author={K{\"o}nig, Lars and Derksen, Alexander and Papenberg, Nils and Haas, Benjamin},
      journal={Radiation Oncology},
      volume={11},
      number={1},
      pages={122},
      year={2016},
      publisher={BioMed Central},
    doi={10.1186/s13014-016-0697-4}
    }
  • Derksen, A., König, L. and Meine, H.: An Alternating Image Registration Approach for Large Scale Bladder Deformations in Radiation Therapy 18th International Conference on the use of Computers in Radiation Therapy (ICCR), London, 2016
    BibTeX Datei
    @article{derksen2016alternating,
      title={An Alternating Image Registration Approach for Large Scale Bladder Deformations in Radiation Therapy},
      author={Derksen, A and König, L and Meine, H},
      journal={18th International Conference on the use of Computers in Radiation Therapy (ICCR), London},
      year={2016},
    }
    
  • Sandmann, C., Hodneland, E. and Modersitzki, J.: A practical guideline for T1 reconstruction from various flip angles in MRI Journal of Algorithms & Computational Technology, vol. 10, no. 4, pp. 213-223, 2016
    BibTeX Link Abstract
    @article{SandmannEtAl2016,
    author = {Constantin Sandmann and Erlend Hodneland and Jan Modersitzki},
    title = {A practical guideline for T1 reconstruction from various flip angles in MRI},
    journal = {Journal of Algorithms \& Computational Technology},
    volume = {10},
    number = {4},
    pages = {213-223},
    year = {2016},
    URL = {http://dx.doi.org/10.1177/1748301816656288},
    abstract = { A fast and robust method for T1 estimation in MRI is the so-called variable flip angle technique. We introduce a novel family of T1 reconstruction methods from data acquired with various flip angles and propose a family member which combines the robustness of a nonlinear- with the computational advantages of a linear reconstruction. The constructed family contains the most common approaches for T1 estimation, namely a linear and a nonlinear approach. A general sensitivity analysis for arbitrary members of the family is established. Advantages of the optimized reconstruction are demonstrated on phantom- as well as real data, showing improvements of up to 24\% as compared with the linear method. As a further means to stabilize T1 estimation, spatial stabilization methods are compared. We demonstrate on phantom and on real data that improved results can be obtained if not only T1 but also a second unknown M0 in the reconstruction is stabilized. }
    }
    
  • Derksen, A., König, L., Meine, H. and Heldmann, S.: A Joint Registration and Segmentation Approach for Large Bladder Deformations in Adaptive Radiotherapy Medical Physics: Proceedings of the AAPM 58th annual meeting, Washington, DC, vol. 43, no. 6, pp. 3429-3429, American Association of Physicists in Medicine, 2016
    BibTeX Link
    @article{derksen2016joint,
      title={A Joint Registration and Segmentation Approach for Large Bladder Deformations in Adaptive Radiotherapy},
      author={Derksen, A and König, L and Meine, H and Heldmann, S},
      journal={Medical Physics: Proceedings of the AAPM 58th annual meeting, Washington, DC},
      volume={43},
      number={6},
      pages={3429--3429},
      year={2016},
      doi={10.1118/1.4956005},
      publisher={American Association of Physicists in Medicine}
    }

2015,

  • Modersitzki, J., Heldmann, S. and N. Papenberg, .: Nonlinear Registration Via Displacement Fields , in Brain Mapping ,, pp. 307 - 314,, Academic Press,, ,, Waltham,, 2015,
    BibTeX Link Link
    @incollection{Modersitzki2015307,
    title = "Nonlinear Registration Via Displacement Fields ",
    editor = "Toga, Arthur W. ",
    booktitle = "Brain Mapping ",
    publisher = "Academic Press",
    edition = "",
    address = "Waltham",
    year = "2015",
    pages = "307 - 314",
    isbn = "978-0-12-397316-0",
    doi = "http://dx.doi.org/10.1016/B978-0-12-397025-1.00300-6",
    url = "http://www.sciencedirect.com/science/article/pii/B9780123970251003006",
    author = "J. Modersitzki and S. Heldmann and N. Papenberg",
    keywords = "Displacement fields, Image fusion,Image registration, Nonlinear registration, Variational formulation ",
    abstract = "Abstract This article presents a brief review on nonlinear registration techniques based on a variational formulation. The main advantages of this setting are its great modeling potential and its modular setting. This enables easy changes and adaptations for fine-tuning for particular applications. Furthermore, this setting also enables the integration of additional information. This can be formulated in terms of either soft or hard constraints, such as privileged handling of anatomical landmarks, local rigidity of structures, and emphasis on volume preservation or limitations of volume changes. The latter is of particular interest for one-to-one displacement fields (also known as diffeomorphic registration). The setting is supported by a rigorous mathematical theory and can be translated into fast and stable implementations. Although the focus of this article is not on the practical realization, important concepts such as multiscale and multilevel representations and reduction of ambiguities of results based on proper regularization are also briefly discussed. "
    }
    

2015

  • Luca, V. D., Benz, T., Kondo, S., König, L., Lübke, D., Rothlübbers, S., Somphone, O., Allaire, S., Bell, M. A. L., F, D. Y., Cifor, A., Grozea, C., Günther, M., Jenne, J., Kipshagen, T., Kowarschik, M., Navab, N., Rühaak, J., Schwaab, J. and Tanner, C.: The 2014 liver ultrasound tracking benchmark Physics in Medicine and Biology, vol. 60, no. 14, pp. 5571, 2015
    BibTeX Link Abstract
    @article{deluca2015the,
      author={V De Luca and T Benz and S Kondo and L König and D Lübke and S Rothlübbers and O Somphone and S Allaire and M A Lediju Bell and D Y F
    Chung and A Cifor and C Grozea and M Günther and J Jenne and T Kipshagen and M Kowarschik and N Navab and J Rühaak and J Schwaab and C
    Tanner},
      title={The 2014 liver ultrasound tracking benchmark},
      journal={Physics in Medicine and Biology},
      volume={60},
      number={14},
      pages={5571},
      url={http://dx.doi.org/10.1088/0031-9155/60/14/5571},
      year={2015}
    }
  • Lotz, J., Olesch, J., Müller, B., Polzin, T., Galuschka, P., Lotz, J. M., Heldmann, S., Laue, H., Warth, A., Lahrmann, B., Grabe, N., Sedlaczek, O., Breuhahn, K. and Modersitzki, J.: Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images IEEE Transactions on Biomedical Engineering, vol. 63, no. 9, pp. 1812-1819, 2015
    BibTeX Link Datei
    @article{Lotz2015,
    abstract = {Objective: Image Registration of whole slide histology images allows the fusion of fine-grained information - like different immunohistochemical stains - from neighboring tissue slides. Traditionally, pathologists fuse this information by looking subsequently at one slide at a time. If the slides are digitized and accurately aligned at cell-level, automatic analysis can be used to ease the pathologist's work. However, the size of those images exceeds the memory capacity of regular computers. Methods: We address the challenge to combine a global motion model that takes the physical cutting process of the tissue into account with image data that is not simultaneously globally available. Typical approaches either reduce the amount of data to be processed or partition the data into smaller chunks to be processed separately. Our novel method first registers the complete images on a low resolution with a nonlinear deformation model and later refines this result on patches by using a second nonlinear registration on each patch. Finally the deformations computed on all patches are combined by interpolation to form one globally smooth nonlinear deformation. The NGF distance measure is used to handle multi-stain images. Results: The method is applied to ten whole slide image pairs of human lung cancer data. The alignment of 85 corresponding structures is measured by comparing manual segmentations from neighboring slides. Their offset improves significantly, by at least 15 %, compared to the low-resolution nonlinear registration. Conclusion/Significance: The proposed method significantly improves the accuracy of multi-stain registration which allows to compare different anti-bodies at cell-level. available. Typical approaches either reduce the amount of data to be processed or partition the data into smaller chunks to be processed separately. Our novel method first registers the complete images on a low resolution with a nonlinear deformation model and later refines this result on patches by using a second nonlinear registration on each patch. Finally the deformations computed on all patches are combined by interpolation to form one globally smooth nonlinear deformation. The NGF distance measure is used to handle multi-stain images.Results: The method is applied to ten whole slide image pairs of human lung cancer data. The alignment of 85 corresponding structures is measured by comparing manual segmentations from neighboring slides. Their offset improves significantly, by at least 15 %, compared to the low-resolution nonlinear registration. Conclusion/Significance: The proposed method significantly improves the accuracy of multi-stain registration which allows to compare different anti-bodies at cell-level.},
    author = {Lotz, J and Olesch, J and M{\"{u}}ller, B and Polzin, T and Galuschka, P and Lotz, J M and Heldmann, S and Laue, H and Warth, A and Lahrmann, B and Grabe, N and Sedlaczek, O and Breuhahn, K and Modersitzki, J},
    doi = {10.1109/TBME.2015.2503122},
    journal = {IEEE Transactions on Biomedical Engineering},
    keywords = {computer-aided diagnosis,digital pathology,high resolution histological scans ,histopathology, image registration},
    title = {{Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images}},
    year = {2015},
    volume = {63}, 
    number = {9},
    pages = {1812--1819}
    }
    
  • Pompe, E., van Rikxoort, E. M., Schmidt, M., Rühaak, J., Estrella, L. G., Vliegenthart, R., Oudkerk, M., de Koning, H. J., van Ginneken, B., de Jong, P. A., Lammers, J. J. and Hoesein, F. A. A. M.: Parametric Response Mapping Adds Value to Current Computed Tomography Biomarkers in Diagnosing Chronic Obstructive Pulmonary Disease American Journal of Respiratory and Critical Care Medicine, vol. 191, no. 9, pp. 1084-1086, Am Thoracic Soc, 2015
    BibTeX Link
    @article{pompe2015parametric,
      title={Parametric Response Mapping Adds Value to Current Computed Tomography Biomarkers in Diagnosing Chronic Obstructive Pulmonary Disease},
      author={Pompe, Esther and van Rikxoort, Eva M and Schmidt, Michael and R{\"u}haak, Jan and Estrella, Leticia Gallardo and Vliegenthart, Rozemarijn and Oudkerk, Matthijs and de Koning, Harry J and van Ginneken, Bram and de Jong, Pim A and Lammers, Jan-Willem J and Hoesein, Firdaus A A Mohamed},
      journal={American {J}ournal of {R}espiratory and {C}ritical {C}are {M}edicine},
      volume={191},
      number={9},
      pages={1084--1086},
      year={2015},
      url={http://www.atsjournals.org/doi/abs/10.1164/rccm.201411-2105LE#.VebzExG8PRY},
      publisher={Am Thoracic Soc}
    }
  • König, L., Derksen, A., Hallmann, M. and Papenberg, N.: Parallel and Memory Efficient Multimodal Image Registration for Radiotherapy using Normalized Gradient Fields in IEEE International Symposium on Biomedical Imaging: From Nano to Macro, New York City, USA, April, 2015
    BibTeX Link Datei Abstract
    @INPROCEEDINGS{konig2015parallel,
    	author = {K\"{o}nig, Lars and Derksen, Alexander and Hallmann, Marc and Papenberg, Nils},
    	booktitle = {IEEE International Symposium on Biomedical Imaging: From Nano to Macro},
    	title = {Parallel and Memory Efficient Multimodal Image Registration for Radiotherapy using Normalized Gradient Fields},
    	year = {2015},
    	address = {New York City, USA},
    	month = {April},
            url = {http://dx.doi.org/10.1109/ISBI.2015.7163977}
    }
  • Weiss, N., Lotz, J. and Modersitzki, J.: Multimodal Image Registration in Digital Pathology Using Cell Nuclei Densities in Bildverarbeitung für die Medizin 2015, Algorithmen – Systeme – Anwendungen, Proceedings des Workshops vom 15. bis 17. März 2015 in Lübeck, pp. 245, Springer Vieweg, Berlin, Heidelberg, mar,, 2015
    BibTeX Link
    @inproceedings{Weiss2015,
    abstract = {Abstract. 3D reconstruction and digital double staining offer pathologists many new insights into tissue structure and metabolism. Key to these applications is the precise registration of histological slide images, that is challenging in several ways. One major challenge are differently stained slides, that highlight different parts of the tissue. In this paper we introduce a new registration method to face this multimodality. It abstracts the image information to cell nuclei densities. By minimizing the distance of these densities an affine transformation is determined that restores the lost spatial correspondences. The proposed density based registration is evaluated using consecutive histological slides. It is compared to a Mutual Information based registration and shown to be more accurate and robust.},
    address = {Berlin, Heidelberg},
    author = {Weiss, Nick and Lotz, Johannes and Modersitzki, Jan},
    booktitle = {Bildverarbeitung f\"{u}r die Medizin 2015, Algorithmen – Systeme – Anwendungen, Proceedings des Workshops vom 15. bis 17. M\"{a}rz 2015 in L\"{u}beck},
    doi = {10.1007/978-3-662-46224-9},
    editor = {Handels, Heinz and Deserno, Thomas M. and Meinzer, Hans-Peter and Tolxdorff, Thomas},
    file = {:home/jo/Seafile/misc/mendeley/Weiss, Lotz, Modersitzki - 2015 - Multimodal Image Registration in Digital Pathology Using Cell Nuclei Densities.pdf:pdf},
    isbn = {9783662462232},
    month = mar,
    pages = {245},
    publisher = {Springer Vieweg},
    title = {{Multimodal Image Registration in Digital Pathology Using Cell Nuclei Densities}},
    year = {2015}
    }
  • Derksen, A., Heldmann, S., Polzin, T. and Berkels, B.: Image registration with sliding motion constraints for 4D CT motion correction in Bildverarbeitung für die Medizin 2015, Algorithmen – Systeme – Anwendungen, Proceedings des Workshops vom 15. bis 17. März 2015 in Lübeck, pp. 335-340, Springer, Informatik aktuell, Berlin, Heidelberg, March,, 2015
    BibTeX Link Abstract
    @inproceedings{2015-BVM-dhpb-sliding,
      title={Image registration with sliding motion constraints for 4D CT motion correction},
      author={Derksen, Alexander and Heldmann, Stefan and Polzin, Thomas and Berkels, Benjamin},
      pages={335--340},
      year={2015},
      publisher={Springer},
      address = {Berlin, Heidelberg},
      booktitle = {Bildverarbeitung f\"{u}r die Medizin 2015, Algorithmen – Systeme –   Anwendungen, Proceedings des Workshops vom 15. bis 17. M\"{a}rz 2015 in L\"{u}beck},
      editor = {Handels, Heinz and Deserno, Thomas M. and Meinzer, Hans-Peter and Tolxdorff, Thomas},
      isbn = {9783662462232},
      month = March,
      url = {http://dx.doi.org/10.1007/978-3-662-46224-9_58},
      series = {Informatik aktuell},
      abstract = {A common assumption in medical image registration is that the estimation of a globally continuous deformation field is plausible in reality. However, a sliding behavior of adjacent organ boundaries (e.g. lung and ribcage) cannot be described in a plausible way by a continuous deformation field. In this paper, we address this issue with a novel registration framework that explicitly models sliding of interfaces and can preserve discontinuities in the deformation field along predefined organ boundaries. Incorporated methods involve constrained nonlinear registration and a finite element discretization on unstructured tetrahedral meshes. Evaluation is based on the freely available DIR-Lab datasets.}
    }
  • König, L., Derksen, A., Heldmann, S., Papenberg, N., Modersitzki, J. and Haas, B.: Deformable image registration with guaranteed local rigidity Radiotherapy and Oncology: Proceedings of the 3rd ESTRO Forum, Barcelona, vol. 115, pp. S197-S198, Elsevier, 2015
    BibTeX Link
    @article{konig2015deformable,
      title={Deformable image registration with guaranteed local rigidity},
      author={K{\"o}nig, L and Derksen, A and Heldmann, S and Papenberg, N and Modersitzki, J and Haas, B},
      journal={Radiotherapy and Oncology: Proceedings of the 3rd ESTRO Forum, Barcelona},
      volume={115},
      pages={S197--S198},
      year={2015},
      publisher={Elsevier},
    doi={10.1016/S0167-8140(15)40405-0}
    }
    
  • Chen, K., Derksen, A., Heldmann, S., Hallmann, M. and Berkels, B.: Deformable Image Registration with Automatic Non-Correspondence Detection in Scale Space and Variational Methods in Computer Vision: 5th International Conference, SSVM 2015, Lège-Cap Ferret, France, May 31 - June 4, 2015, Proceedings, pp. 360-371, Springer International Publishing, Cham, 2015
    BibTeX Link Link
    @inproceedings{Chen2015Deformable,
    title={Deformable Image Registration with Automatic Non-Correspondence Detection},
    author={Chen, Kanglin and Derksen, Alexander and Heldmann, Stefan and Hallmann, Marc and Berkels, Benjamin},
    editor={Aujol, Jean-Fran{\c{c}}ois and Nikolova, Mila and Papadakis, Nicolas},
    booktitle={Scale Space and Variational Methods in Computer Vision: 5th International Conference, SSVM 2015, L{\`e}ge-Cap Ferret, France, May 31 - June 4, 2015, Proceedings},
    year={2015},
    publisher={Springer International Publishing},
    address={Cham},
    pages={360--371},
    isbn={978-3-319-18461-6},
    doi={10.1007/978-3-319-18461-6_29},
    url={http://dx.doi.org/10.1007/978-3-319-18461-6_29}
    }
    
  • Lellmann, J., Papafitsoros, K., Schönlieb, C. and Spector, D.: Analysis and Application of a non-local Hessian SIAM Journal on Imaging Sciences, vol. 8, no. 4, pp. 2161-2202, 2015
    BibTeX
    @Article{Lellmann2015,
      author =      {Lellmann, J. and Papafitsoros, K. and Sch\"onlieb, C. and Spector, D.},
      title =       {Analysis and Application of a non-local Hessian},
      journal =     {SIAM Journal on Imaging Sciences},
      year =        {2015},
      volume =      {8},
      number =      {4},
      pages =       {2161--2202},
      owner =       {Jan},
      timestamp =   {2014.07.02},
    }
    
  • Heldmann, S., Polzin, T., Derksen, A. and Berkels, B.: An Image Registration Framework for Sliding Motion with Piecewise Smooth Deformations in Scale Space and Variational Methods in Computer Vision, vol. 9087, pp. 335-347, Springer International, Lecture Notes in Computer Science, Lège-Cap Ferret, France, May/June, 2015
    BibTeX
    @inproceedings{2015-hpdb-SSVM,
    author = {Stefan Heldmann and Thomas Polzin and Alexander Derksen and Benjamin Berkels},
    title = {An Image Registration Framework for Sliding Motion with Piecewise Smooth Deformations},
    booktitle = {Scale Space and Variational Methods in Computer Vision},
    year = {2015},
    month = {May/June},
    abstract = {We present a novel variational framework for image registration with explicit modeling of sliding motion, as it occurs, e.g., in the medical context at organ boundaries. The key of our method is a piecewise smooth deformation model that allows for discontinuities at the sliding interfaces while keeping the sliding domain in contact with its surrounding. The presented approach is generic and can be used with a large class of both image similarity measures and regularizers for the deformations. A useful byproduct of the proposed method is an automatic propagation of a given segmentation from one image to the other. We proof existence of minimizers under rather mild assumptions and present an efficient scheme for computing a numerical solution. The minimization is based on a splitting approach with alternating derivative based Gauss-Newton and fast first order convex optimization. Finally, we evaluate the proposed method on synthetic and real data.},
    series = {Lecture Notes in Computer Science},
    pages = {335--347},
    address = {Lège-Cap Ferret, France},
    publisher = {Springer International},
    volume = {9087},
    editor = {Jean-François Aujol and Mila Nikolova and Nicolas Papadakis},
    }
  • Rühaak, J., Derksen, A., Heldmann, S., Hallmann, M. and Meine, H.: Accurate CT-MR image registration for deep brain stimulation: a multi-observer evaluation study in SPIE Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February, 2015
    BibTeX
    @INPROCEEDINGS{2015-SPIE-RDHHM,
    	author = {R\"{u}haak, Jan and Derksen, Alexander and Heldmann, Stefan and Hallmann, Marc and Meine, Hans},
    	booktitle = {SPIE Medical Imaging 2015: Image Processing},
    	title = {Accurate CT-MR image registration for deep brain stimulation: a multi-observer evaluation study},
    	year = {2015},
    	address = {Orlando, Florida, USA},
    	month = {February}	
    }
  • Chen, K. and Derksen, A.: A Variational Method for Contructing Unbiased Atlas with Probabilistic Label Maps in Workshop: Bildverarbeitung für die Medizin, 2015
    BibTeX
    @INPROCEEDINGS{2015-BVM-CD,
    	author = {Chen, Kanglin and Derksen, Alexander},
    	booktitle = {Workshop: Bildverarbeitung für die Medizin},
    	title = {A Variational Method for Contructing Unbiased Atlas with Probabilistic Label Maps},
    	year = {2015},
    	address = {},
    	month = {}	
    }
  • Papenberg, N., König, L., Heldmann, S., Derksen, A., Modersitzki, J. and Haas, B.: A Locally Variable Transformation Model for Deformable Image Registration Using Tissue Properties in Varian Research Partnership Symposium, Atlanta, Georgia, USA, March, 2015
    BibTeX
    @INPROCEEDINGS{papenberg2015locally,
    	author = {Papenberg, Nils and König, Lars and Heldmann, Stefan and Derksen, Alexander and Modersitzki, Jan and Haas, Benjamin},
    	booktitle = {Varian Research Partnership Symposium},
    	title = {A Locally Variable Transformation Model for Deformable Image Registration Using Tissue Properties},
    	year = {2015},
    	address = {Atlanta, Georgia, USA},
    	month = {March}	
    }
  • Wang, L., Strehlow, J., Rühaak, J., Diez, Y., Diekmann, S., Laue, H. and Hahn, H. K.: A fast alignment method for breast MRI follow-up studies using automated breast segmentation and current-prior registration in SPIE Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February, 2015
    BibTeX
    @INPROCEEDINGS{2015-SPIE-WSRDDLH,
    	author = {Wang, Lei and Strehlow, Jan and R\"{u}haak, Jan and Diez, Yago and Diekmann, Susanne and Laue, Hendrik and Hahn, Horst K.},
    	booktitle = {SPIE Medical Imaging 2015: Image Processing},
    	title = {A fast alignment method for breast MRI follow-up studies using automated breast segmentation and current-prior registration},
    	year = {2015},
    	address = {Orlando, Florida, USA},
    	month = {February}	
    }
  • Kappes, J., Andres, B., Hamprecht, F. A., Schnörr, C., Nowozin, S., Batra, D., Kim, S., Kausler, B. X., Kröger, T., Lellmann, J., Komodakis, N., Savchynskyy, B. and Rother, C.: A Comparative Study of Modern Inference Techniques for Discrete Energy Minimization Problems Int.~J.~Comp.~Vis, 2015
    BibTeX
    @Article{Kappes2015,
      Title                    = {A Comparative Study of Modern Inference Techniques for Discrete Energy Minimization Problems},
      Author                   = {Kappes, J.~H. and Andres, B. and Hamprecht, F. A. and Schn\"orr, C. and Nowozin, S. and Batra, D. and Kim, S. and Kausler, B. X. and Kröger, T and Lellmann, J. and Komodakis, N. and Savchynskyy, B. and Rother, C.},
      Journal                  = {Int.~J.~Comp.~Vis},
      Year                     = {2015},
      Note                     = {(online first)},
    }

2014

  • Lotz, J., Berger, J., Müller, B., Breuhahn, K., Grabe, N., Heldmann, S., Homeyer, A., Lahrmann, B., Laue, H., Olesch, J., Schwier, M., Sedlaczek, O. and Warth, A.: Zooming in: High Resolution 3D Reconstruction of Differently Stained Histological Whole Slide Images in SPIE Medical Imaging, pp. 904104-1-7, 2014
    BibTeX Datei Abstract
    @inproceedings{lotz2014zooming,
      title={Zooming in: High Resolution 3D Reconstruction of Differently Stained Histological Whole Slide Images},
      author={Johannes Lotz and Judith Berger and Benedikt M\"uller and Kai Breuhahn and Niels Grabe and Stefan Heldmann and Andr\'{e} Homeyer and Bernd Lahrmann and Hendrik Laue and Janine Olesch and Michael Schwier and Oliver Sedlaczek and Arne Warth
    },
      booktitle={SPIE Medical Imaging},
      year={2014},
      organization={International Society for Optics and Photonics},
    pages = {904104-1--7}
    } 
  • Beuthien, B.: Restringierte Medizinische Bildregistrierung 2014
    BibTeX
    @phdthesis{2014-PhD-Beuthien,
      Author = {Bj\"orn Beuthien},
      Title = {Restringierte Medizinische Bildregistrierung},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2014},
    }
  • Polzin, T., Rühaak, J., Werner, R., Handels, H. and Modersitzki, J.: Lung Registration using Automatically Detected Landmarks Methods of Information in Medicine, vol. 53, pp. 250-256, 2014
    BibTeX Datei
    @ARTICLE{2014-MIM-PRWHM, 
      author = {Polzin, Thomas and R\"{u}haak, Jan and Werner, Ren\'{e} and Handels, Heinz and Modersitzki, Jan},
      title = {Lung Registration using Automatically Detected Landmarks},
      journal = {Methods of Information in Medicine},
      year = {2014},
      volume={53},
      pages={250--256}
    }
  • Georgii, J., Bartscherer, T., Degel, C., Fonfara, H., Hewener, H., Kipshagen, T., Kocev, B., Lotz, J., Ojdanic, D., Olesch, J., Rothlübbers, S., Speicher, D., Tretbar, S., Hahn, H. and Günther, M.: Improving Breast Biopsies by Motion Tracking. Proc. of Image-Guided Interventions in Proc. of Image-Guided Interventions (IGIC), pp. 79-80, 2014
    BibTeX
    @inproceedings{georgi2014IGIC,
    author = {Georgii, J and Bartscherer, T and Degel, C and Fonfara, H and Hewener, H and Kipshagen, T and Kocev, B and Lotz, J and Ojdanic, D and Olesch, J and Rothlübbers, S and Speicher, D and Tretbar, S and Hahn, H and Günther, M},
    title = { Improving Breast Biopsies by Motion Tracking. Proc. of Image-Guided Interventions},
    booktitle = {Proc. of Image-Guided Interventions (IGIC)},
    pages = {79-80},
    year = {2014}
    }
  • Berg, R., König, L., Rühaak, J., Lausen, R. and Fischer, B.: Highly Efficient Image Registration for Embedded Systems Using a Distributed Multicore DSP Architecture Journal of Real-Time Image Processing, Springer, November, 2014
    BibTeX Link Datei
    @ARTICLE{2014-JRTIP-BKRLF,
      author = {Berg, Roelof and K\"{o}nig, Lars and R\"{u}haak, Jan and Lausen, Ralph and Fischer, Bernd},
      title = {{H}ighly {E}fficient {I}mage {R}egistration for {E}mbedded {S}ystems
    	{U}sing a {D}istributed {M}ulticore {DSP} {A}rchitecture},
      journal = {{J}ournal of {R}eal-{T}ime {I}mage {P}rocessing},
      year = {2014},
      month = {November},
      publisher = {Springer},
      url = {http://dx.doi.org/10.1007/s11554-014-0457-3}
    }
  • Tramnitzke, F., Rühaak, J., König, L., Modersitzki, J. and Köstler, H.: GPU Based Affine Linear Image Registration using Normalized Gradient Fields in Proc. Seventh International Workshop on High Performance Computing for Biomedical Image Analysis (HPC-MICCAI), pp. 5-14, Boston, USA, September, 2014
    BibTeX Datei
    @INPROCEEDINGS{2014-MICCAI-HPC-TRKMK,
      author = {Tramnitzke, Florian and R\"{u}haak, Jan and K\"{o}nig, Lars and Modersitzki, Jan and K\"{o}stler, Harald},
      title = {{GPU} {B}ased {A}ffine {L}inear {I}mage {R}egistration
    using {N}ormalized {G}radient {F}ields},
      booktitle = {Proc. Seventh International Workshop on High Performance Computing for Biomedical Image Analysis (HPC-MICCAI)},
      year = {2014},
      address = {Boston, USA},
      month = {September},
    pages = {5--14}
    }
  • Sorrentino, S., Peperhove, M., Kaireit, T., Rühaak, J., Strehlow, J., Wacker, F., Vogel-Claussen, J. and Shin, H.: Entwicklung eines virtuellen 2D-Herz-Phantoms für die regionaler myokardialer Wandbewegung mittels nicht-rigider Bildregistrierung Fortschritte auf dem Gebiet der Röntgenstrahlen und der bildgebenden Verfahren, vol. 186, no. S 01, pp. RK\_VO207\_4, 2014
    BibTeX Link
    @INPROCEEDINGS{sorrentino2014Entwicklung,
      author = {Sorrentino,S and Peperhove,M and Kaireit,T and R{\"u}haak,J and Strehlow,J
    	and Wacker,F and Vogel-Claussen,J and Shin,H},
      title = {{E}ntwicklung eines virtuellen 2{D}-{H}erz-{P}hantoms f{\"u}r die
    	{B}erechnung regionaler myokardialer {W}andbewegung mittels nicht-rigider
    	{B}ildregistrierung},
      year = {2014},
      volume = {186},
      number = {S 01},
      pages = {RK{\_}VO207{\_}4},
      bdsk-url-1 = {http://dx.doi.org/10.1055/s-0034-1372881},
      da = {22.04.2014},
      date = {2014///},
      date-added = {2014-07-10 15:19:06 +0000},
      date-modified = {2014-07-10 15:19:06 +0000},
      doi = {10.1055/s-0034-1372881},
      isbn = {1438-9029},
      journal = {{F}ortschritte auf dem Gebiet der {R}{\"o}ntgenstrahlen und der bildgebenden Verfahren},
      la = {DE},
      m2 = {RK{\_}VO207{\_}4},
      ty = {JOUR}
    }
    
  • Lotz, J., Berger, J., Thiele, H., Olesch, J., Müller, B., Breuhahn, K., Warth, A., Grabe, N., Lahrmann, B., Sedlaczek, O. and Heldmann, S.: Elastic image registration on whole slide images for digital double staining and 3D reconstruction in Poster Submission at the European Molecular Imaging Meeting - EMIM, 2014
    BibTeX Link
    @inproceedings{lotz2014elastic,
      title={Elastic image registration on whole slide images for digital double staining and 3D reconstruction},
      author={Johannes Lotz and Judith Berger and Herbert Thiele and Janine Olesch and Benedikt Müller and Kai Breuhahn and Arne Warth  and Niels Grabe and Bernd Lahrmann and Oliver Sedlaczek and Stefan Heldmann
    },
      booktitle={Poster Submission at the European Molecular Imaging Meeting - EMIM},
      year={2014},
      url = {http://s.fhg.de/wwu},
      organization={European Society for Molecular Imaging}
    }
  • Haase, R., Lohaus, F., Rühaak, J., Straaten, D. v., Zöphel, K. and Richter, C.: Einfluss deformierbarer Bildregistrierung von PET/CT-Verlaufsdaten auf die Signalwerte innerhalb einer Kontur: Deformation auf Konturen oder Bilddaten anwenden? in Proceedings of 20. Jahrestagung der Deutschen Gesellschaft für Radioonkologie (DEGRO), Düsseldorf, 2014
    BibTeX
    @inproceedings{2014-DEGRO-HLRSZR,
    title={Einfluss deformierbarer {B}ildregistrierung von {P}{E}{T}/{C}{T}-{V}erlaufsdaten auf die {S}ignalwerte innerhalb einer {K}ontur: {D}eformation auf {K}onturen oder {B}ilddaten anwenden?},
    author={Robert Haase and Fabian Lohaus and Jan R\"uhaak and D\"orte van Straaten and Klaus Z\"ophel and Christian Richter},
    booktitle={Proceedings of 20. Jahrestagung der Deutschen Gesellschaft f\"ur Radioonkologie (DEGRO), D\"usseldorf},
    year={2014}
    }
  • Chen, K., Heldmann, S., Rühaak, J. and Hallmann, M.: Construction of Average STN Atlas using Image Registration and Reconstruction in Proc. MICCAI 2014 Workshop on Deep Brain Stimulation Methodological Challenges - 2nd Edition, Boston, USA, September, 2014
    BibTeX Datei
    @INPROCEEDINGS{2014-DBS-CHRH,
    	author = {Chen, Kanglin and Heldmann, Stefan and R\"{u}haak, Jan and Hallmann, Marc},
    	booktitle = {Proc. MICCAI 2014 Workshop on Deep Brain Stimulation Methodological Challenges - 2nd Edition},
    	title = {Construction of Average STN Atlas using Image Registration and Reconstruction},
    	year = {2014},
    	address = {Boston, USA},
    	month = {September}	
    }
  • Bronsert, P., Enderle-Ammour, K., Bader, M., Timme, S., Kuehs, M., Csanadi, A., Kayser, G., Kohler, I., Bausch, D., Hoeppner, J., Hopt, U., Keck, T., Stickeler, E., Passlick, B., Schilling, O., Reiss, C., Vashist, Y., Brabletz, T., Berger, J., Lotz, J., Olesch, J., Werner, M. and Wellner, U.: Cancer cell invasion and EMT marker expression - a three-dimensional study of the human cancer-host interface - The Journal of Pathology, John Wiley & Sons, Ltd, 2014
    BibTeX Link Abstract
    @article {PATH:PATH4416,
    author = {Bronsert, P and Enderle-Ammour, K and Bader, M and Timme, S and Kuehs, M and Csanadi, A and Kayser, G and Kohler, I and Bausch, D and Hoeppner, J and Hopt, UT and Keck, T and Stickeler, E and Passlick, B and Schilling, O and Reiss, CP and Vashist, Y and Brabletz, T and Berger, J and Lotz, J and Olesch, J and Werner, M and Wellner, UF},
    title = {Cancer cell invasion and EMT marker expression - a three-dimensional study of the human cancer-host interface -},
    journal = {The Journal of Pathology},
    publisher = {John Wiley & Sons, Ltd},
    issn = {1096-9896},
    url = {http://dx.doi.org/10.1002/path.4416},
    pages = {},
    keywords = {cancer cell invasion, epithelial-mesenchymal transition, tumor budding, human adenocarcinoma, three dimensional reconstruction},
    year = {2014}
    }
    
  • Olesch, J.: Bildregistrierung für die navigierte Chirurgie Springer Vieweg, Aktuelle Forschung Medizintechnik, 2014
    BibTeX
    @BOOK{Olesch201311,
    title={Bildregistrierung für die navigierte Chirurgie},
    series = {Aktuelle Forschung Medizintechnik},
    author={Janine Olesch},
    publisher={Springer Vieweg},
    year={2014},
    isbn={9783658056544},
    price={EUR 59,99},
    totalpages={267}
    }
  • Trede, D., Bartels, A., Schiffler, S., Oetjen, J., Becker, M., Aichler, M., Lieb, F., Steinhorst, K., Berger, J., Heldmann, S., Thiele, H., Walch, A., Maass, P. and Alexandrov, T.: A spatially-aware highly-sensitive peak picking method for MALDI-imaging 2014
    BibTeX Link
    @Misc{trede2014DGMS,
      author = 	 {Dennis Trede and Andreas Bartels and Stefan Schiffler and Janina Oetjen and Michael Becker and Michaela Aichler and Florian Lieb and Klaus Steinhorst and Judith Berger and Stefan Heldmann and Herbert Thiele and Axel Walch and Peter Maass and Theodore Alexandrov},
      title = 	 {A spatially-aware highly-sensitive peak picking method for MALDI-imaging},
      note = {Poster Submission at 47. Jahrestagung der Deutschen Gesellschaft für Massenspektrometrie, Frankfurt am Main},
      year = 	 {2014},
      url = 	 {http://www.pharmazie.uni-frankfurt.de/PharmChem/DGMS2014/Programm/Abstracts/Abstracts-Poster.pdf}
    }
  • König, L., Kipshagen, T. and Rühaak, J.: A Non-Linear Image Registration Scheme for Real-Time Liver Ultrasound Tracking using Normalized Gradient Fields in Proc. MICCAI Challenge on Liver Ultrasound Tracking (CLUST 2014), pp. 29-36, Boston, USA, September, 2014
    BibTeX Datei Abstract
    @INPROCEEDINGS{2014-CLUST-KKR,
    	author = {K\"{o}nig, Lars and Kipshagen, Till and R\"{u}haak, Jan},
    	booktitle = {Proc. MICCAI Challenge on Liver Ultrasound Tracking (CLUST 2014)},
    	title = {A Non-Linear Image Registration Scheme for Real-Time Liver Ultrasound Tracking using Normalized Gradient Fields},
    	year = {2014},
    	address = {Boston, USA},
    	month = {September},
    pages = {29--36}
    }
  • König, L. and Rühaak, J.: A Fast and Accurate Parallel Algorithm for Non-Linear Image Registration using Normalized Gradient Fields in IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Beijing, China, April, 2014
    BibTeX Link Datei Abstract
    @INPROCEEDINGS{2014-ISBI-KR,
    	author = {K\"{o}nig, Lars and R\"{u}haak, Jan},
    	booktitle = {IEEE International Symposium on Biomedical Imaging: From Nano to Macro},
    	title = {A Fast and Accurate Parallel Algorithm for Non-Linear Image Registration using Normalized Gradient Fields},
    	year = {2014},
    	address = {Beijing, China},
    	month = {April}	
            url = {http://dx.doi.org/10.1109/ISBI.2014.6867937}
    }
  • Thiele, H., Heldmann, S., Trede, D., Strehlow, J., Wirtz, S., Dreher, W., Berger, J., Oetjen, J., Kobarg, J. H., Fischer, B. and thers, .: 2D and 3D MALDI-imaging: conceptual strategies for visualization and data mining Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, vol. 1844, no. 1, pp. 117-137, Elsevier, 2014
    BibTeX
    @article{thiele20142d,
      title={2D and 3D MALDI-imaging: conceptual strategies for visualization and data mining},
      author={Thiele, Herbert and Heldmann, Stefan and Trede, Dennis and Strehlow, Jan and Wirtz, Stefan and Dreher, Wolfgang and Berger, Judith and Oetjen, Janina and Kobarg, Jan Hendrik and Fischer, Bernd and others},
      journal={Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics},
      volume={1844},
      number={1},
      pages={117--137},
      year={2014},
      publisher={Elsevier}
    }
    

2013

  • Berger, J., Lotz, J., Olesch, J., Breuhahn, M. S., Müller, B., Warth, A., Grabe, N., Lahrmann, B. and Sedlaczek, O.: Virtual Double Staining Using Elastic Image Registration 2013
    BibTeX Link Datei
    @Misc{berger2013virtual,
      author = 	 {Judith Berger and Johannes Lotz and Janine Olesch and Mark Schenk
    Kai Breuhahn and Benedikt Müller and Arne Warth and Niels Grabe and Bernd Lahrmann and
    Oliver Sedlaczek},
      title = 	 {Virtual Double Staining Using Elastic Image Registration},
      note = {Poster Submission at Pathology Visions, San Antonio},
      year = 	 {2013},
      url = 	 {https://digitalpathologyassociation.org/poster-presentations}
    }
  • Lotz, J., Fischer, B., Olesch, J. and Günther, M.: Real time motion analysis in 4D medical imaging using conditional density propagation in SPIE Medical Imaging 2015: Image Processing, vol. 8669, pp. 86690T-86690T-7, 2013
    BibTeX Link Link Datei Abstract
    @inproceedings{lotz2013real,
    author = {Lotz, Johannes and Fischer, Bernd and Olesch, Janine and Günther, Matthias},
    title = {Real time motion analysis in 4D medical imaging using conditional density propagation},
    booktitle ={SPIE Medical Imaging 2015: Image Processing},
    volume = {8669},
    number = {},
    pages = {86690T-86690T-7},
    abstract = {Motion, like tumor movement due to respiration, constitutes a major problem in radiotherapy and/or diagnostics.
    A common idea to compensate for the motion in 4D imaging, is to invoke a registration strategy, which aligns
    the images over time. This approach is especially challenging if real time processing of the data and robustness
    with respect to noise and acquisition errors is required.
    To this end, we present a novel method which is based only on selected image features and uses a probabilistic
    approach to compute the wanted transformations of the 3D images. Moreover, we restrict the search space to
    rotation, translation and scaling.
    In an initial phase, landmarks in the first image of the series have to be identified, which are in the course
    of the scheme automatically transferred to the next image. To find the associated transformation parameters,
    a probabilistic approach, based on factored sampling, is invoked. We start from a state set containing a fixed
    number of different candidate parameters whose probabilities are approximated based on the image information
    at the landmark positions. Subsequent time frames are analyzed by factored sampling from this state set and
    by superimposing a stochastic diffusion term on the parameters.
    The algorithm is successfully applied to clinical 4D CT data. Landmarks have been placed manually to mark
    the tumor or a similar structure in the initial image whose position is then tracked over time. We achieve a
    processing rate of up to 12 image volumes per second. The accuracy of the tracking after five time steps is
    measured based on expert placed landmarks. We achieve a mean landmark error of less than 2 mm in each
    dimension in a region with radius of 25 mm around the target structure.},
    year = {2013},
    doi = {10.1117/12.2006842},
    URL = { http://dx.doi.org/10.1117/12.2006842},
    eprint = {}
    }
    
  • Oetjen, J., Aichler, M., Trede, D., Strehlow, J., Berger, J., Heldmann, S., Becker, M., Gottschalk, M., Kobarg, J. H., Wirtz, S., Schiffler, S., Thiele, H., Walch, A., Maass, P. and Alexandrov, T.: MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation Journal of Proteomics, vol. 90, pp. 52-60, 2013
    BibTeX
    @article{2013-JP-OATSBHBGKWSTWMA,
    	Author = {Oetjen, Janina and Aichler, Michaela and Trede, Dennis and Strehlow, Jan and Berger, Judith and Heldmann, Stefan and Becker, Michael and Gottschalk, Michael and Kobarg, Jan Hendrik and Wirtz, Stefan and Schiffler, Stefan and Thiele, Herbert and Walch, Axel and Maass, Peter and Alexandrov, Theodore},
    	Journal = {Journal of Proteomics},
    	Pages = {52--60},
    	Title = {MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation},
    	Volume = {90},
    	Year = {2013}}
  • Polzin, T., Rühaak, J., Werner, R., Handels, H. and Modersitzki, J.: Lung Registration using Automatically Detected Landmarks in GMDS 2013: 58. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V., Lübeck, Germany, September, 2013
    BibTeX
    @INPROCEEDINGS{2013-GMDS-PRWHM,
      author = {Polzin, T and R{\"u}haak, J and Werner, R and Handels, H and Modersitzki, J},
     booktitle = {GMDS 2013: 58. Jahrestagung der Deutschen Gesellschaft f{\"u}r Medizinische Informatik, Biometrie und Epidemiologie e. V.},
    title = {Lung Registration using Automatically Detected Landmarks},
    year = {2013},
    address = {Lübeck, Germany},
    month = {September}
    }
  • Ruthotto, L., Mohammadi, S., Heck, C., Modersitzki, J. and Weiskopf, N.: Hyperelastic Susceptibility Artifact Correction of DTI in SPM in Bildverarbeitung für die Medizin 2013, pp. 344-349, Springer Berlin Heidelberg, Informatik aktuell, 2013
    BibTeX Link Link Auszeichnung
    @incollection{2013-BVM-RMHMW,
    	Author = {Ruthotto, Lars and Mohammadi, Siawoosh and Heck, Constantin and Modersitzki, Jan and Weiskopf, Nikolaus},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2013},
    	Doi = {10.1007/978-3-642-36480-8_60},
    	Editor = {Meinzer, Hans-Peter and Deserno, Thomas Martin and Handels, Heinz and Tolxdorff, Thomas},
    	Isbn = {978-3-642-36479-2},
    	Language = {German},
    	Pages = {344-349},
    	Publisher = {Springer Berlin Heidelberg},
    	Series = {Informatik aktuell},
    	Title = {Hyperelastic Susceptibility Artifact Correction of DTI in SPM},
    	Url = {http://dx.doi.org/10.1007/978-3-642-36480-8_60},
    	Year = {2013},
    	Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-36480-8_60}}
  • Rühaak, J., Heldmann, S., Kipshagen, T. and Fischer, B.: Highly Accurate Fast Lung CT Registration in SPIE Medical Imaging 2013: Image Processing, Lake Buena Vista, Florida, USA, February, 2013
    BibTeX
    @INPROCEEDINGS{2013-SPIE-RHKF,
    	author = {R\"{u}haak, Jan and Heldmann, Stefan and Kipshagen, Till and Fischer, Bernd},
    	booktitle = {SPIE Medical Imaging 2013: Image Processing},
    	title = {Highly Accurate Fast Lung CT Registration},
    	year = {2013},
    	address = {Lake Buena Vista, Florida, USA},
    	month = {February}	
    }
    
  • König, L., Papenberg, N., Haas, B. and Modersitzki, J.: Deformable Registration for Adaptive Radiotherapy with Guaranteed Local Rigidity Constraints in Varian Research Partnership Symposium, Atlanta, Georgia, USA, March, 2013
    BibTeX Poster
    @INPROCEEDINGS{2013-Deformable,
    	author = {K\"{o}nig, Lars and Papenberg, Nils and Haas, Benjamin and Modersitzki, Jan},
    	booktitle = {Varian Research Partnership Symposium},
    	title = {Deformable Registration for Adaptive Radiotherapy with Guaranteed Local Rigidity Constraints},
    	year = {2013},
    	address = {Atlanta, Georgia, USA},
    	month = {March}	
    }
  • Kainmüller, D.: Deformable Meshes for Accurate Automatic Segmentation of Medical Image Data 2013
    BibTeX
    @phdthesis{2013-PhD-Kainmueller,
      Author = {Dagmar Kainm\"uller},
      Title = {Deformable Meshes for Accurate Automatic Segmentation of Medical Image Data},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2013},
    }
  • Polzin, T., Rühaak, J., Werner, R., Strehlow, J., Heldmann, S., Handels, H. and Modersitzki, J.: Combining Automatic Landmark Detection and Variational Methods for Lung CT Registration in Proc. Fifth International MICCAI Workshop on Pulmonary Image Analysis (PIA 2013), pp. 85-96, Nagoya, Japan, September, 2013
    BibTeX
    @INPROCEEDINGS{2013-PIA-PRWSHHM,
    	author = {Polzin, Thomas and R\"{u}haak, Jan and Werner, Ren\'{e} and Strehlow, Jan and Heldmann, Stefan and Handels, Heinz and Modersitzki, Jan},
    	booktitle = {Proc. Fifth International MICCAI Workshop on Pulmonary Image Analysis (PIA 2013)},
    	title = {Combining Automatic Landmark Detection and
    Variational Methods for Lung CT Registration},
    	year = {2013},
    	address = {Nagoya, Japan},
    	month = {September},
           pages = {85--96}
    }
  • Olesch, J.: Bildregistrierung für die navigierte Chirurgie 2013
    BibTeX
    @phdthesis{OleschPhD201311_2,
    title={Bildregistrierung f\"ur die navigierte Chirurgie},
    author={Janine Olesch},
    School = {Institute of Medical Informatics, University of L\"ubeck},
    year={2013},
    }
  • Barendt, S. and Modersitzki, J.: A variational model for SPECT reconstruction with a nonlinearly transformed attenuation prototype International Journal of Computer Mathematics, vol. 90, no. 1, pp. 82-91, 2013
    BibTeX Abstract
    @article{BarendtModersitzkiIJCM2013,
      author = {Barendt, Sven and Modersitzki, Jan},
      title = {A variational model for SPECT reconstruction with a nonlinearly transformed attenuation prototype},
      journal = {International Journal of Computer Mathematics},
      volume = {90},
      number = {1},
      pages = {82-91},
      year = {2013}
    }
  • Burger, M., Modersitzki, J. and Ruthotto, L.: A hyperelastic regularization energy for image registration SIAM Journal on Scientific Computing, vol. 35, no. 1, pp. B132-B148, SIAM, 2013
    BibTeX Datei Abstract
    @article{BurgerEtAl2013,
      title={A hyperelastic regularization energy for image registration},
      author={Burger, M. and Modersitzki, J. and Ruthotto, L.},
      journal={SIAM Journal on Scientific Computing},
      volume={35},
      number={1},
      pages={B132--B148},
      year={2013},
      publisher={SIAM}
    }
  • Peter, T. and Plonka, G.: A Generalized Prony Method for Reconstruction of Sparse Sums of Eigenfunctions of Linear Operators. (revised preprint as download) Inverse Problems, vol. 29, no. 2, January, 2013
    BibTeX Datei
    @article{PP2013,
    	author = {Peter, Thomas and Plonka, Gerlind},
    	title = {A Generalized Prony Method for Reconstruction of Sparse Sums of Eigenfunctions of Linear Operators. (revised preprint as download)},
            journal={Inverse Problems},
      volume={29},
      number={2},
    	year = {2013},
    	month = {January}	
    }
  • Rühaak, J., König, L., Hallmann, M., Papenberg, N., Heldmann, S., Schumacher, H. and Fischer, B.: A Fully Parallel Algorithm for Multimodal Image Registration Using Normalized Gradient Fields in IEEE International Symposium on Biomedical Imaging: From Nano to Macro, San Francisco, California, USA, April, 2013
    BibTeX Link Datei
    @INPROCEEDINGS{2013-ISBI-RKHPHSF,
    	author = {R\"{u}haak, Jan and K\"{o}nig, Lars and Hallmann, Marc and Papenberg, Nils and Heldmann, Stefan and Schumacher, Hanno and Fischer, Bernd},
    	booktitle = {IEEE International Symposium on Biomedical Imaging: From Nano to Macro},
    	title = {A Fully Parallel Algorithm for Multimodal Image Registration Using Normalized Gradient Fields},
    	year = {2013},
    	address = {San Francisco, California, USA},
    	month = {April}	
    url = {http://dx.doi.org/10.1109/ISBI.2013.6556539}
    }
  • Mueller, B., Olesch, J., Lotz, J., Barendt, S., Sedlaczek, O., Lahrmann, B., Grabe, N., Bestvater, F., Kauczor, U., Schnabel, P. A., Hoffmann, H., Fischer, B., Schirmacher, P., Warth, A. and Breuhahn, K.: 3D reconstruction of lung adenocarcinomas—one module for the development of mathematical multiscale models of lung cancer in Abstracts of the 97th Annual Meeting of the German Society of Pathology. May 23-26, 2013. Heidelberg. Germany. Der Pathologe, vol. 34 Suppl 1, no. 1, pp. 6-163, Springer-Verlag, may,, 2013
    BibTeX Link
    @abstract{Mueller2013,
    author = {Mueller, B and Olesch, J and Lotz, J and Barendt, S and Sedlaczek, O and Lahrmann, B and Grabe, N and Bestvater, F and Kauczor, U and Schnabel, P A and Hoffmann, H and Fischer, B and Schirmacher, P and Warth, A and Breuhahn, K},
    booktitle = {Abstracts of the 97th Annual Meeting of the German Society of Pathology. May 23-26, 2013. Heidelberg. Germany. Der Pathologe},
    issn = {1432-1963},
    keywords = {Animals,Humans,Pathology},
    month = may,
    number = {1},
    pages = {6--163},
    pmid = {23636587},
    publisher = {Springer-Verlag},
    title = {{3D reconstruction of lung adenocarcinomas—one module for the development of mathematical multiscale models of lung cancer}},
    url = {http://www.ncbi.nlm.nih.gov/pubmed/23636587},
    volume = {34 Suppl 1},
    year = {2013}
    }
    
  • Thiele, H., Heldmann, S., Trede, D., Strehlow, J., Wirtz, S., Dreher, W., Berger, J., Oetjen, J., Kobarg, J. H., Fischer, B. and Maass, P.: 2D and 3D MALDI-imaging: Conceptual strategies for visualization and data mining Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2013
    BibTeX
    @article{2013-BBA-THTSWDBOKFM,
    	Author = {Thiele, Herbert and Heldmann, Stefan and Trede, Dennis and Strehlow, Jan and Wirtz, Stefan and Dreher, Wolfgang and Berger, Judith and Oetjen, Janina and Kobarg, Jan Hendrik and Fischer, Bernd and Maass, Peter},
    	Journal = {Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics},
    	Title = {2D and 3D MALDI-imaging: Conceptual strategies for visualization and data mining},
    	Year = {2013}}
    

2012

  • Rühaak, J. and Heldmann, S.: Variational Lung Registration with Explicit Boundary Alignment February, 2012
    BibTeX
    @misc{2012-RH-EMPIRE10,
      title={Variational Lung Registration with Explicit Boundary Alignment},
      author={Rühaak, Jan and Heldmann, Stefan},
      institution={The EMPIRE10 challenge},
      month = {February},
      year={2012}
    }
  • Barendt, S. and Modersitzki, J.: SPECT Reconstruction with a Transformed Attenuation Prototype at Multiple Levels in Bildverarbeitung für die Medizin 2012, pp. 352-357, Springer, 2012
    BibTeX
    @inproceedings{BarendtModersitzkiBVM2012,
      title={SPECT Reconstruction with a Transformed Attenuation Prototype at Multiple Levels},
      author={Barendt, Sven and Modersitzki, Jan},
     booktitle={Bildverarbeitung f{\"u}r die Medizin 2012},
     pages     = {352-357},
      year={2012},
      publisher={Springer}
    }
  • Ruthotto, L., Hodneland, E. and Modersitzki, J.: Registration of Dynamic Contrast Enhanced MRI with Local Rigidity Constraint in Biomedical Image Registration, 5th International Workshop WBIR2012, Springer, 2012
    BibTeX Datei Abstract
    @inproceedings{2012-DCEMRI-WBIR,
    	title={Registration of Dynamic Contrast Enhanced {MRI} with Local Rigidity Constraint},
      	author={Ruthotto, L. and Hodneland, E. and  Modersitzki,J.},
     	booktitle={Biomedical Image Registration, 5th International Workshop {WBIR2012}},
      	year={2012},
    	editor={Dawant B.M., Fitzpatrick J.M., Rueckert D., and Christensen G.E.},
      	publisher={Springer}
    }
  • Gigengack, F., Ruthotto, L., Kösters, T., Jiang, X., Modersitzki, J., Burger, M., Wolters, C. and Schäfers, K.: Pipeline for Motion Correction in Dual Gated PET in Nuclear Science Symposium and Medical Imaging Confereence (NSS/MIC), 2012 IEEE, pp. 2983-2984, 2012
    BibTeX
    @INPROCEEDINGS{2012-GigengackEtAl-NSS-MIC-B,
      author = {F. Gigengack and L. Ruthotto and T. K{\"o}sters and X. Jiang and
    	J. Modersitzki and M. Burger and C.H. Wolters and K. Schäfers},
      title = {Pipeline for Motion Correction in Dual Gated PET},
      booktitle = {Nuclear Science Symposium and Medical Imaging Confereence (NSS/MIC), 2012 IEEE},
      year = {2012},
      pages = {2983--2984}
    }
  • Gigengack, F., Ruthotto, L., Burger, M., Wolters, C. H., Jiang, X. and Schäfers, K. P.: Motion Correction in Dual Gated Cardiac PET using Mass-Preserving Image Registration IEEE Transactions on Medical Imaging, vol. 31, no. 3, pp. 698-712, 2012
    BibTeX
    @article{2012-VAMPIRE-IEEE,
    author = {Gigengack, Fabian and Ruthotto, Lars and Burger, Martin and Wolters, Carsten H and Jiang, Xiaoyi and Sch{\"a}fers, Klaus P},
    title = {{Motion Correction in Dual Gated Cardiac PET using Mass-Preserving Image Registration}},
    journal = {IEEE Transactions on Medical Imaging},
    year = {2012},
    volume = {31},
    number = {3},
    pages = {698--712},
    }
  • Ruthotto, L.: Hyperelastic Image Registration - Theory, Numerical Methods, and Applications 2012
    BibTeX
    @phdthesis{2012-PhD-Ruthotto,
      Author = {Lars Ruthotto},
      Title = {Hyperelastic Image Registration - Theory, Numerical Methods, and Applications},
      School = {Fachbereich Mathematik und Informatik, Westfälische Wilhelms-Universität Münster},
      Year = {2012},
    }
  • Trede, D., Schiffler, S., Becker, M., Wirtz, S., Steinhorst, K., Strehlow, J., Aichler, M., Kobarg, J. H., Oetjen, J., Heldmann, S., Walch, A., Thiele, H., Maass, P. and Alexandrov, T.: Exploring 3D MALDI imaging mass spectrometry data: 3D spatial segmentation of mouse kidney Analytical Chemistry, vol. 84(14), pp. 6079-87, 2012
    BibTeX
    @article{2012-AC-TSBWSSAKOHWTMA,
    	Author = {Trede, Dennis and Schiffler, Stefan and Becker, Michael and Wirtz, Stefan and Steinhorst, Klaus and Strehlow, Jan and Aichler, Michaela and Kobarg, Jan Hendrik and Oetjen, Janina and Heldmann, Stefan and Walch, Axel and Thiele, Herbert and Maass, Peter and Alexandrov, Theodore},
    	Journal = {Analytical Chemistry},
    	Pages = {6079-87},
    	Title = {Exploring 3D MALDI imaging mass spectrometry data: 3D spatial segmentation of mouse kidney},
    	Volume = {84(14)},
    	Year = {2012}}
    
  • Strehlow, J., Rühaak, J., Kluck, C. and Fischer, B.: Effiziente Verpunktung pulmonaler MR-Bilder zur Evaluierung von Registrierungsergebnissen in Bildverarbeitung für die Medizin 2012, pp. 219-224, Springer, Informatik aktuell, 2012
    BibTeX
    @INPROCEEDINGS{2012-BVM-SRKF,
       author = {Strehlow, Jan and R\"{u}haak, Jan and Kluck, Christina and Fischer, Bernd},
       booktitle = {Bildverarbeitung f{\"u}r die Medizin 2012},
       title = {Effiziente Verpunktung pulmonaler MR-Bilder zur Evaluierung von Registrierungsergebnissen},
       series = {Informatik aktuell},
       publisher = {Springer}
       year = {2012},   
       pages = {219-224},
    }
    
  • Ruthotto, L., Kugel, H., Olesch, J., Fischer, B., Modersitzki, J., Burger, M. and Wolters, C.: Diffeomorphic Susceptibility Artefact Correction of Diffusion-Weighted Magnetic Resonance Images Physics in Medicine and Biology, vol. 57, pp. 5715-5731, 2012
    BibTeX Link Datei Abstract
    @article{RuthottoEtAl2012,
    author = {Ruthotto, L and Kugel, H and Olesch, J and Fischer, B and Modersitzki, J and Burger, M and Wolters, CH},
    title = {Diffeomorphic Susceptibility Artefact Correction of Diffusion-Weighted Magnetic Resonance Images},
    journal = {Physics in Medicine and Biology},
    year = {2012},
    volume={57},
    pages = {5715--5731},
    url={http://stacks.iop.org/0031-9155/57/5715}
    }
  • Gigengack, F., Ruthotto, L., Jiang, X., Modersitzki, ., Burger, M., Hermann, S. and Schäfers, K. P.: Atlas-Based Whole-Body PET-CT Segmentation using a Passive Contour Distance in Proceedings of the MICCAI Workshop on Medical Computer Vision 2012, pp. 1-10, Springer LNCS, 2012
    BibTeX
    @INPROCEEDINGS{2012-GigengackEtAl-MICCAI,
      author = {Gigengack, Fabian and Ruthotto, Lars and Jiang, Xiaoyi and Modersitzki,
    	Jan and Burger, Martin and Hermann, Sven and Sch{\"a}fers, Klaus
    	P.},
      title = {Atlas-Based Whole-Body {PET-CT} Segmentation using a Passive Contour
    	Distance},
      booktitle = {Proceedings of the MICCAI Workshop on Medical Computer Vision 2012},
      year = {2012},
      pages = {1--10},
      publisher = {Springer LNCS}
    }
  • Ruthotto, L., Gigengack, F., Burger, M., Wolters, C., Jiang, X., Schäfers, K. and Modersitzki, J.: A Simplified Pipeline for Motion Correction in Dual Gated Cardiac PET in Bildverarbeitung für die Medizin 2012, Springer, 2012
    BibTeX Abstract Auszeichnung
    @inproceedings{2012-VAMPIRE-BVM,
      title={A Simplified Pipeline for Motion Correction in Dual Gated Cardiac {PET}},
      author={Ruthotto, L. and Gigengack, F. and Burger, M. and Wolters, C.H., and Jiang, X. and Sch{\"a}fers, K. and           	
    		  Modersitzki,J.},
     booktitle={Bildverarbeitung f{\"u}r die Medizin 2012},
      year={2012},
      publisher={Springer}
    }
  • Thiele, H., Heldmann, S. and Fischer, B.: 3D Visualisierung von Organismen in Proceedings der INFORMATIK 2012, vol. 208, pp. 1535-1545, Gesellschaft für Informatik, GI-Editon Lecture Notes in Informatics, Bonn, 2012
    BibTeX
    @inproceedings{2012-INF-THF,
    	Address = {Bonn},
    	Author = {Thiele, H. and Heldmann, S. and Fischer, B.},
    	Booktitle = {Proceedings der INFORMATIK 2012},
    	Editor = {Goltz, U. and Magnor, M. and Appelrath, H-J and Matthies, HK and Balke, W-T and Wolf, L.},
    	Pages = {1535--1545},
    	Publisher = {Gesellschaft f{\"u}r Informatik},
    	Series = {GI-Editon Lecture Notes in Informatics},
    	Title = {3D Visualisierung von Organismen},
    	Volume = {208},
    	Year = {2012}}
    

2011

  • Göbel, B. and Langemann, D.: Systemic investigation of a brain-centered model of the human energy metabolism Theory Biosci, vol. 130, no. 1, pp. 5-18, 2011
    BibTeX
    @ARTICLE{2011-TB-GL,
      author = {B. G\"obel and D. Langemann},
      title = {Systemic investigation of a brain-centered model of the human energy
    	metabolism},
      journal = {Theory Biosci},
      year = {2011},
      volume = {130},
      pages = {5-18},
      number = {1},
      owner = {BrittaGoebel},
      timestamp = {2010.12.09}
    }
  • Barendt, S. and Modersitzki, J.: SPECT Reconstruction with a Nonlinear Transformed Attenuation Prototype in Bildverarbeitung für die Medizin, Informatik aktuell, 2011
    BibTeX
    @inproceedings{2011-BVM-BM,
      author    = {Barendt, Sven and Modersitzki, Jan},
      title     = {SPECT Reconstruction with a Nonlinear Transformed Attenuation Prototype},
      booktitle = {Bildverarbeitung f{\"u}r die Medizin},
      year      = {2011},
      Series = {Informatik aktuell},
      }
  • Hamer, J., Kleine, M., Barendt, S., Krajewski, J., Konitzer, J., Gáspár, E., Meller, B., Knobloch, J., Russlies, M., Buchmann, I., Barkhausen, J., Modersitzki, J., Ebel, G. and Buzug, T. M.: Molecular Imaging of Inflammations at Implant Interfaces (M4I) - Part of Molecular Imaging North Competence Center (MOIN CC) Biomed Tech, vol. 56, 2011
    BibTeX
    @article{MOINCCBioTech2011,
      author = {J. Hamer and M. Kleine and S. Barendt and J. Krajewski and J. Konitzer and E. Gáspár and B. Meller and J. Knobloch and M. Russlies and I. Buchmann and J. Barkhausen and J. Modersitzki and G. Ebel and T. M. Buzug},
      title = {Molecular Imaging of Inflammations at Implant Interfaces (M4I) -
    	Part of Molecular Imaging North Competence Center (MOIN CC)},
      journal = {Biomed Tech},
      year = {2011},
      volume = {56},
    }
  • Lange, T.: Modeling Prior Knowledge for Image Registration in Liver Surgery 2011
    BibTeX
    @phdthesis{2011-PhD-Lange,
      Author = {Thomas Lange},
      Title = {Modeling Prior Knowledge for Image Registration in Liver Surgery},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2011},
    }
  • Göbel, B.: Mathematische Modellierung des menschlichen Energiestoffwechsels: Die zentrale Rolle des Gehirns 2011
    BibTeX
    @phdthesis{2011-PhD-Goebel,
      Author = {Britta G\"obel},
      Title = {Mathematische Modellierung des menschlichen Energiestoffwechsels: Die zentrale Rolle des Gehirns},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2011},
    }
  • Chung, M. and Göbel, B.: Mathematical Modeling of the Human Energy Metabolism based on the Selfish Brain Theory Advances in Systems Biology, Springer, vol. (in press), 2011
    BibTeX
    @ARTICLE{2011-Springer-CG,
      author = {M. Chung and B. Göbel},
      title = {Mathematical Modeling of the Human Energy Metabolism based on the
    	Selfish Brain Theory},
      journal = {Advances in Systems Biology, Springer},
      year = {2011},
      volume = {(in press)},
      owner = {BrittaGoebel},
      timestamp = {2011.05.15}
    }
  • Chung, M., Göbel, B., Peters, A., Oltmanns, K. and Moser, A.: Mathematical modeling of the biphasic dopaminergic response to glucose J Biomed Sci Eng, vol. 4, pp. 136-145, 2011
    BibTeX
    @ARTICLE{2011-JBSE-CGPOM,
      author = {M. Chung and B. G\"obel and A. Peters and K.M. Oltmanns and A. Moser},
      title = {Mathematical modeling of the biphasic dopaminergic response to glucose},
      journal = {J Biomed Sci Eng},
      year = {2011},
      volume = {4},
      pages = {136-145},
      owner = {BrittaGoebel},
      timestamp = {2011.03.23}
    }
  • Gigengack, F., Ruthotto, L., Burger, M., Wolters, C., Jiang, X. and Schäfers, K.: Mass-Preserving Motion Correction of PET: Displacement Field vs. Spline Transformation in Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 2011 IEEE, pp. 3088-3090, 2011
    BibTeX
    @inproceedings{2011-VAPIRE-MICspline,
      title={Mass-Preserving Motion Correction of PET: Displacement Field vs. Spline Transformation},
      author={Gigengack, F. and Ruthotto, L. and Burger, M. and Wolters, C.H. and Jiang, X. and Sch{\"a}fers, K.P.},
     booktitle={Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 2011 IEEE},
      year={2011},
       pages={3088--3090},
     organization={IEEE}
    }
  • Rühaak, J., Heldmann, S. and Fischer, B.: Improving Lung Registration by Incorporating Anatomical Knowledge: A Variational Approach in Proc. Fourth International MICCAI Workshop on Pulmonary Image Analysis (PULMO 2011), Toronto, Canada, September, 2011
    BibTeX
    @INPROCEEDINGS{2011-MICCAI-PULMO-RHF,
    	author = {R\"{u}haak, Jan and Heldmann, Stefan and Fischer, Bernd},
    	booktitle = {Proc. Fourth International MICCAI Workshop on Pulmonary Image Analysis (PULMO 2011)},
    	title = {Improving Lung Registration by Incorporating Anatomical Knowledge: A Variational Approach},
    	year = {2011},
    	address = {Toronto, Canada},
    	month = {September},
    }
  • Olesch, J. and Fischer, B.: Focussed registration of tracked 2D US to 3D CT data of the liver in Bildverarbeitung für die Medizin, Informatik aktuell, 2011
    BibTeX
    @inproceedings{2011-BVM-OF,
      author    = {Olesch, Janine and Fischer, Bernd},
      title     = {Focussed registration of tracked 2D US to 3D CT data of the liver},
      booktitle = {Bildverarbeitung f{\"u}r die Medizin},
      year      = {2011},
      Series = {Informatik aktuell},
      }
  • Olesch, J., Beuthien, B., Heldmann, S., Papenberg, N. and Fischer, B.: Fast intra-operative nonlinear registration of 3D-CT to tracked, selected 2D-ultrasound slices in SPIE Medical Imaging 2011: Visualization, Image-Guided Procedures, and Modeling, Lake Buena Vista, Florida, USA, February, 2011
    BibTeX
    @INPROCEEDINGS{2011-SPIE-OBHPF,
    	author = {Olesch, Janine and Beuthien, Björn and Heldmann, Stefan and Papenberg, Nils and Fischer, Bernd},
    	booktitle = {SPIE Medical Imaging 2011: Visualization, Image-Guided Procedures, and Modeling},
    	title = {Fast intra-operative nonlinear registration of 3D-CT to tracked, selected 2D-ultrasound slices},
    	year = {2011},
    	address = {Lake Buena Vista, Florida, USA},
    	month = {February}	
    }
  • Zimmer, V., Papenberg, N., Modersitzki, J. and Fischer, B.: Bildregistrierung zur Verbrennungsanalyse in Bildverarbeitung für die Medizin 2011, pp. 159-163, Springer, 2011
    BibTeX
    @INPROCEEDINGS{2011-BVM-ZPMF,
      author = {Zimmer, Veronika and Papenberg, Nils and Modersitzki, Jan and Fischer,
    	Bernd},
      title = {Bildregistrierung zur Verbrennungsanalyse},
      booktitle = {Bildverarbeitung f\"ur die Medizin 2011},
      year = {2011},
      editor = {H Handels},
      pages = {159--163},
      publisher = {Springer}
    }
  • Moltz, J. H., Braunewell, S., Rühaak, J., Heckel, F., Barbieri, S., Tautz, L., Hahn, H. K. and Peitgen, H.: Analysis of Variability in Manual Liver Tumor Delineation in CT Scans in 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Chicago, Illinois, USA, March, 2011
    BibTeX
    @INPROCEEDINGS{2011-ISBI-MBRHBTHP,
    	author = {Moltz, Jan Hendrik and Braunewell, Stefan and R\"{u}haak, Jan and Heckel, Frank and Barbieri, Sebastiano and Tautz, Lennart and Hahn, Horst Karl and Peitgen, Heinz-Otto},
    	booktitle = {8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro},
    	title = {Analysis of Variability in Manual Liver Tumor Delineation in CT Scans},
    	year = {2011},
    	address = {Chicago, Illinois, USA},
    	month = {March}	
    }
  • Moltz, J. H., Rühaak, J., Hahn, H. K. and Peitgen, H.: A Novel Adaptive Scoring System for Segmentation Validation with Multiple Reference Masks in SPIE Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February, 2011
    BibTeX
    @INPROCEEDINGS{2011-SPIE-MRHP,
    	author = {Moltz, Jan Hendrik and R\"{u}haak, Jan and Hahn, Horst Karl and Peitgen, Heinz-Otto},
    	booktitle = {SPIE Medical Imaging 2011: Image Processing},
    	title = {A Novel Adaptive Scoring System for Segmentation Validation with Multiple Reference Masks},
    	year = {2011},
    	address = {Lake Buena Vista, Florida, USA},
    	month = {February}	
    }

2010

  • Beuthien, B., Papenberg, B., Heldmann, S. and Fischer, B.: Volume-constrained image registration for pre- and post-operative CT liver data in SPIE Medical Imaging, San Diego, California, USA, February, 2010
    BibTeX Datei
    @INPROCEEDINGS{2010-SPIE-BPHF,
      author    = {Beuthien, B. and Papenberg, B. and Heldmann, S. and Fischer, B.},
      title     = {Volume-constrained image registration for pre- and post-operative {CT} liver data},
      booktitle = {SPIE Medical Imaging},
      year      = {2010},
      address   = {San Diego, California, USA},
      month     = {February}}
  • Moltz, J. H., Rühaak, J., Engel, C., Kayser, U. and Peitgen, H.: Validation of Liver Tumor Segmentation in CT Scans by Relating Manual and Algorithmic Performance - A Preliminary Study in Proc. MICCAI Workshop on Computational Imaging Biomarkers for Tumors - From Qualitative to Quantitative (CIBT 2010), Beijing, China, September, 2010
    BibTeX Link
    @INPROCEEDINGS{2010-MICCAI-CIBT-MREKP,
    	author = {Moltz, Jan Hendrik and R\"{u}haak, Jan and Engel, Christiane and Kayser, Ulrike and Peitgen, Heinz-Otto},
    	booktitle = {Proc. MICCAI Workshop on Computational Imaging Biomarkers for Tumors - From Qualitative to Quantitative (CIBT 2010)},
    	title = {Validation of Liver Tumor Segmentation in CT Scans by Relating Manual and Algorithmic Performance - A Preliminary Study},
    	year = {2010},
    	address = {Beijing, China},
    	month = {September},
    	url = {http://midasjournal.com/download/viewpdf/754/1/download} 
    }
  • Ruppertshofen, H., Kabus, S. and Fischer, B.: Tensor Grid Based Image Registration with Application to Ventilation Estimation on 4D CT Lung Data International Journal of Computer Assisted Radiology and Surgery, 2010
    BibTeX Datei
    @article{2010-IJCARS-RKF,
    	Author = {Ruppertshofen, Heike and Kabus, Sven and Fischer, Bernd},
    	Journal = {International Journal of Computer Assisted Radiology and Surgery},
    	Title = {Tensor Grid Based Image Registration with Application to Ventilation Estimation on {4D CT} Lung Data},
    	Year = {2010}
    }
  • Beuthien, B., Kamen, A. and Fischer, B.: Recursive Green`s Function Registration in Proc. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2010
    BibTeX Datei
    @INPROCEEDINGS{2010-MICCAI-BKF,
      author = {Beuthien, Bj\"{o}rn and Kamen, Ali and Fischer, Bernd},
      title = {Recursive Green's Function Registration},
      booktitle = {Proc. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)},
      year = {2010}
    }
  • Haber, E., Horesh, R. and Modersitzki, J.: Numerical Methods for Constrained Image Registration Numerical Linear Algebra with Applications, vol. 17, no. 2-3, pp. 343-359, 2010
    BibTeX
    @ARTICLE{2010-NLAA-HHM,
      author = {Haber, Eldad and Horesh, R. and Modersitzki, Jan},
      title = {Numerical Methods for Constrained Image Registration},
      journal = {Numerical Linear Algebra with Applications},
      volume = {17},
      number = {2-3},
      year = {2010},
      pages = {343--359},
     }
  • Papenberg, N., Schumacher, H., Heldmann, S., Böhler, T., van Straaten, D. and Wirtz, S.: Multimodale Registrierung von Knochen-Szintigraphien und Röntgenbildern in Bildverarbeitung für die Medizin, pp. 335-339, 2010
    BibTeX
    @inproceedings{2010-BVM-PSHBSW,
    	Author = {Papenberg, N. and Schumacher, H. and Heldmann, S. and B{\"o}hler, T. and van Straaten, D. and Wirtz, S.},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin},
    	Pages = {335--339},
    	Title = {Multimodale Registrierung von Knochen-Szintigraphien und R{\"o}ntgenbildern},
    	Year = {2010}}
    
  • Heldmann, S.: Multimodal Registration of MR Images with a Novel Least-squares Distance Measure Medical Imaging 2010: Image Processing, SPIE, February, 2010
    BibTeX Link Datei
    @conference{2010-SPIE-H,
      author = {Heldmann, Stefan},
      title = {Multimodal Registration of {MR} Images with a Novel Least-squares Distance Measure},
      journal = {Medical Imaging 2010: Image Processing },
      Xvolume = {7623},
      year = {2010},
      publisher={SPIE},
      month={February},
      DOI={10.1117/12.844466},
      adress={San Diego},
    }
  • Ens, K.: Kombinierte Segmentierung und Registrierung 2010
    BibTeX
    @phdthesis{2010-PhD-Ens,
      Author = {Konstantin Ens},
      Title = {Kombinierte Segmentierung und Registrierung},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2010},
    }
  • Heldmann, S., Beuthien, B., Olesch, J., Papenberg, N. and Fischer, B.: Improved Minimal-Invasive Laparoscopic Liver Surgery by Registration of 3D CT and 2D Ultrasound Slices in BMT 2010 - FAL-Sessions, Hot-Topic Sessions, Projektsessions (BMT 2010 - FAL-Sessions - Hot-Topic Sessions - Projektsessions), Rostock, Germany, 2010
    BibTeX Datei
    @inproceedings{2010-BMT-HBOPF,
    	Address = {Rostock, Germany},
    	Author = {Heldmann, Stefan and Beuthien, Bj{\"o}rn  and Olesch, Janine and Papenberg, Nils and Fischer, Bernd},
    	Booktitle = {BMT 2010 - FAL-Sessions, Hot-Topic Sessions, Projektsessions (BMT 2010 - FAL-Sessions - Hot-Topic Sessions - Projektsessions)},
    	Title = {Improved Minimal-Invasive Laparoscopic Liver Surgery by Registration of 3D CT and 2D Ultrasound Slices},
    	Year = {2010},
    }
  • Göbel, B., Langemann, D., Oltmanns, K. M. and Chung, M.: Compact Energy Metabolism Model: Brain Controlled Energy Supply Journal of Theoretical Biology, vol. 264, pp. 1214-1224, 2010
    BibTeX Link
    @article{2010-JTB-GLOC,
    title = {Compact Energy Metabolism Model: Brain Controlled Energy Supply},
    journal = {Journal of Theoretical Biology},
    volume = {264},
    pages = {1214-1224},
    year = {2010},
    issn = {0022-5193},
    url = {http://www.sciencedirect.com/science/article/B6WMD-4YM7FS0-1/2/5847c422c6ba837cd32d9438c0f4219e},
    author = {G\"{o}bel, Britta and Langemann, Dirk and Oltmanns, Kerstin M. and Chung, Matthias},
    keywords = {Energy metabolism},
    keywords = {Glucose model},
    keywords = {Dynamical system},
    keywords = {Stability analysis},
    keywords = {Model size reduction},
    }
  • Fischer, B., Dawant, B. M. and Lorenz, C.: Biomedical Image Registration, 4th International Workshop, WBIR 2010 vol. 6204, Springer, Lecture Notes in Computer Science, 2010
    BibTeX
    @book{2010-WBIR-FDL,
    	Author = {Fischer, Bernd and Dawant, Benoit M. and Lorenz, Cristian },
    	Publisher = {Springer},
    	Series = {Lecture Notes in Computer Science},
    	Title = {Biomedical Image Registration, 4th International Workshop, WBIR 2010},
    	Volume = {6204},
    	Year = {2010}
    }
  • Pöschl, C., Modersitzki, J. and Scherzer, O.: A Variational Setting for Volume Constrained Image Registration Inverse Problems and Imaging, vol. X, no. 2-3, pp. 1-18, 2010
    BibTeX Datei
    @ARTICLE{2010-IPI-PMS,
      author = { P\"{o}schl, Christiane and Modersitzki, Jan and Scherzer, Otmar},
      title = {A Variational Setting for Volume Constrained Image Registration},
      journal = {Inverse Problems and Imaging},
      volume = {X},
      number = {2-3},
      year = {2010},
      pages = {1-18},
    }
  • Olesch, J., Ruthotto, L., Kugel, H., Skare, S., Fischer, B. and Wolters, C. H.: A Variational Approach for the Correction of Field-inhomogeneities in EPI Sequences Medical Imaging 2010: Image Processing, vol. 7623, no. 1, pp. 76230K, SPIE, 2010
    BibTeX Datei
    @inproceedings{2010-SPIE-ORKSFW,
    	Author = {Olesch, Janine and Ruthotto, Lars and Kugel, Harald and Skare, Stefan and Fischer, Bernd and Wolters, Carsten H.},
    	Editor = {Benoit M. Dawant and David R. Haynor},
    	Journal = {Medical Imaging 2010: Image Processing},
    	Location = {San Diego, California, USA},
    	Number = {1},
    	Numpages = {8},
    	Pages = {76230K},
    	Publisher = {SPIE},
    	Title = {A Variational Approach for the Correction of Field-inhomogeneities in EPI Sequences},
    	Volume = {7623},
    	Year = {2010}
    }
  • Ihsani, A., Modersitzki, J. and Farncombe, T.: A Fully Automated Approach to Segmentation and Registration of 3D Medical Image Data for Pulmonary Diagnosis in Proceedings of the 3rd Workshop on Pulmonary Image Analysis, 2010, pp. 97-109, Beijing, 2010
    BibTeX
    @INPROCEEDINGS{2010-Beijing-IFM,
      author = {Alvin Ihsani and Jan Modersitzki and Troy Farncombe},
      title = {A Fully Automated Approach to Segmentation and Registration of {3D}
    	Medical Image Data for Pulmonary Diagnosis},
      booktitle = {Proceedings of the 3rd Workshop on Pulmonary Image Analysis, 2010},
      year = {2010},
      pages = {97--109},
      address = {Beijing}
    }

2009

  • Ens, K., Wenzel, F. and Fischer, B.: Verbesserung der Symmetrie von Hirnaufnahmen entlang der Sagittalebene in Bildverarbeitung für die Medizin 2009, pp. 187 - 191, Springer Berlin/ Heidelberg, Informatik aktuell, 2009
    BibTeX Link Datei
    @conference{2009-BVM-EWF,
    	Author = {Ens, Konstantin and Wenzel, Fabian and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2009},
    	Editor = {{H.-P. Meinzer} and T.M. Deserno and H Handels and T Tolxdoff},
    	Pages = {187 -- 191},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {Verbesserung der {S}ymmetrie von {H}irnaufnahmen entlang der {S}agittalebene},
    	Year = {2009},
    	Publisher={Springer Berlin/ Heidelberg},
    	DOI={10.1007/978-3-540-93860-6_38},
    	ISBN={978-3-540-93859-0},
    }
  • Wirtz, S.: Registrierung von histologischen Schnitten 2009
    BibTeX
    @phdthesis{2009-PhD-Wirtz,
      Author = {Stefan Wirtz},
      Title = {Registrierung von histologischen Schnitten},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2009},
    }
  • Schumacher, H., Modersitzki, J. and Fischer, B.: Reconstruction and motion correction in SPECT imaging - a combined approach in Proceedings of the 12th Korea-Germany joint workshop on Advanced Medical Image Processing, pp. 32 -41, Munich, 2009
    BibTeX
    @inproceedings{2009-KOREA-SMF, 
    	Address = {Munich},
    	Author = {Schumacher,Hanno and Modersitzki, Jan and Fischer, Bernd},
    	Booktitle = {Proceedings of the 12th Korea-Germany joint workshop on Advanced Medical Image Processing},
    	Pages = {32 --41},
    	Title = {Reconstruction and motion correction in {SPECT} imaging -- a combined approach},
    	Year = {2009}
    }
  • Conrad, M., Hubold, C., Fischer, B. and Peters, A.: Modeling the Hypothalamus-Pituitary-Adrenal System: Homeostasis by Interacting Positive and Negative Feedback Journal of Biological Physics, vol. 35, no. 2, pp. 149 - 162, Springer, 2009
    BibTeX Link Datei
    @article{2009-JBP-CHFA,
    	Author = {Conrad, Matthias and Hubold, Christian and Fischer, Bernd and Peters, Achim},
    	Journal = {Journal of Biological Physics},
    	Pages = {149 -- 162},
    	Title = {Modeling the Hypothalamus-Pituitary-Adrenal System: Homeostasis by Interacting Positive and Negative Feedback},
    	Volume = {35},
    	Number={2},
    	Year = {2009},
    	publisher={Springer}
    	DOI={10.1007/s10867-009-9134-3},
    	Bdsk-Url-1 = {http://dx.doi.org/10.1007/s10867-009-9134-3}
    }
  • Olesch, J., Papenberg, N., Lange, T., Conrad, M. and Fischer, B.: Matching CT and Ultrasound Data of the Liver by Landmark Constrained Image Registration Medical Imaging 2009: Visualization, Image-Guided Procedures, and Modeling, vol. 7261,72610G, SPIE, 2009
    BibTeX Datei
    @inproceedings{2009-SPIE-OPLCF,
    	Author = {Olesch, Janine and Papenberg, Nils and Lange, Thomas and Conrad, Matthias and Fischer, Bernd},
    	Editor = {Miga, Michael I. and  Wong, Kenneth H..},
    	Title = {Matching {CT} and Ultrasound Data of the Liver by Landmark Constrained Image Registration},
    	Journal = {Medical Imaging 2009: Visualization, Image-Guided Procedures, and Modeling},
    	Volume = {7261,72610G},
    	Year = {2009},
    	Numpages = {7},
    	Publisher = {SPIE},
    }
  • Lange, T., Papenberg, N., Olesch, J., Fischer, B. and Schlag, P. M.: Landmark Constrained Non-rigid Image Registration with Anisotropic Tolerances in World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany, vol. 25/IV, pp. 2238-2241, Springer, IFMBE Proceedings, 2009
    BibTeX
    @inproceedings{2009-WCMP-LPOFS,
    	Author = {Lange, Thomas and Papenberg, Nils and Olesch, Janine and Fischer, Bernd and Schlag, Peter M.},
    	Title = {Landmark Constrained Non-rigid Image Registration with Anisotropic Tolerances},
    	booktitle = {World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany},
    	Editor = {Olaf D\"{o}ssel and Wolfgang C. Schlegel},
    	Pages = {2238--2241},
    	Publisher = {Springer},
    	Series = {IFMBE Proceedings},
    	Volume = {25/IV},
    	Year = {2009}
    }
  • Papenberg, N., Olesch, J., Lange, T., Schlag, P. M. and Fischer, B.: Landmark Constrained Non-parametric Image Registration with Isotropic Tolerances in Bildverarbeitung für die Medizin, pp. 122-126, Springer, Informatik aktuell, 2009
    BibTeX Datei
    @inproceedings{2009-BVM-POLSF,
      author    = {Papenberg, Nils and Olesch, Janine and Lange, Thomas and Schlag, Peter M. and Fischer, Bernd},
      title     = {Landmark Constrained Non-parametric Image Registration with Isotropic Tolerances},
      booktitle = {Bildverarbeitung f{\"u}r die Medizin},
       editor    = {Hans-Peter Meinzer and Thomas Martin Deserno and Heinz Handels and Thomas Tolxdorff},
      year      = {2009},
      Series = {Informatik aktuell},
      pages     = {122-126},
      publisher = {Springer},
    }
  • Ens, K., Heldmann, S., Modersitzki, J. and Fischer, B.: Improving a Registration and/or Segmentation Task by Incorporating Characteristics of the Displacement Field in Proceedings of the SPIE 2009, Medical Imaging, vol. 5370, pp. 304-313, SPIE, 2009
    BibTeX Datei
    @INPROCEEDINGS{2009-SPIE-EHMF,
      	author = {Ens, Konstantin and Heldmann, Stefan and Modersitzki, Jan and Fischer, Bernd},
     	 title = {Improving a Registration and/or Segmentation Task by Incorporating Characteristics of the Displacement Field},
      	booktitle = {Proceedings of the SPIE 2009, Medical Imaging},
      	year = {2009},
      	editor = {JM Fitzpatrick and M Sonka},
      	volume = {5370},
      	pages = {304--313},
      	publisher = {SPIE},
    }
  • Ruppertshofen, H., Kabus, S. and Fischer, B.: Image Registration using Tensor Grids for Lung Ventilation Studies in Bildverarbeitung für die Medizin 2009, pp. 117 - 121, Springer, Informatik aktuell, 2009
    BibTeX Link Datei
    @conference{2009-BVM-RKF,
    	Author = {Ruppertshofen, Heike  and Kabus, Sven and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2009},
    	Editor = {{H.-P. Meinzer} and T.M. Deserno and H. Handels and T. Tolxdoff},
    	Pages = {117 -- 121},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {Image Registration using Tensor Grids for Lung Ventilation Studies},
    	Year = {2009}
    	DOI={10.1007/978-3-540-93860-6_24},
    	ISBN={978-3-540-93859-0},
    }
  • Modersitzki, J.: FAIR: Flexible Algorithms for Image Registration SIAM, Philadelphia, 2009
    BibTeX
    @BOOK{2009-FAIR, 
      title = {{FAIR}: Flexible Algorithms for Image Registration},
      publisher = {SIAM},
      address = {Philadelphia},
      year = {2009},
      author = {Modersitzki, Jan},
    }
    
  • Heldmann, S. and Zidowitz, S.: Elastic Registration of Multiphase CT Images of Liver in SPIE Medical Imaging 2009: Image Processing, vol. 7259, SPIE, March, 2009
    BibTeX Link Datei
    @conference{2009-SPIE-HZ,
      author = {Heldmann, Stefan and Zidowitz, Stephan},
      title = {Elastic Registration of Multiphase {CT} Images of Liver},
      booktitle={SPIE Medical Imaging 2009: Image Processing},
      volume = {7259},
      year = {2009},
      month={March},
      publisher={SPIE},
      location={Lake Buena Vista, FL, USA },
      DOI={10.1117/12.811415},
    }
  • Ens, K., Wenzel, F., Young, S., Modersitzki, J. and Fischer, B.: Design of a Synthetic Database for the Validation of Non-linear Registration and Segmentation of MR Brain Images in Proceedings of the SPIE 2009, Medical Imaging, vol. 7259, 725933, SPIE, 2009
    BibTeX Datei
    @INPROCEEDINGS{2009-SPIE-EWYMF, 
      author = {Ens, Konstantin and  Wenzel, Fabian and Young, Stewart and Modersitzki, Jan and Fischer, Bernd},
      title = {Design of a Synthetic Database for the Validation of Non-linear Registration and Segmentation of {MR} Brain Images},
      booktitle = {Proceedings of the SPIE 2009, Medical Imaging},
      year = {2009},
      Editor = {J.P.W. Pluim and B.M. Dawant},
      Volume = {7259, 725933},
      Newpages = {304--313},
      publisher = {SPIE},
     }
  • Schumacher, H., Modersitzki, J. and Fischer, B.: Combined Reconstruction and Motion Correction in SPECT Imaging IEEE Transactions on Nuclear Science, vol. 56, pp. 73-80, 2009
    BibTeX Datei
    @article{2009-ITNS-SMF,
    	Author = {Schumacher, Hanno and Modersitzki, Jan and Fischer, Bernd},
    	Journal = {IEEE Transactions on Nuclear Science},
    	Pages = {73--80},
    	Title = {Combined Reconstruction and Motion Correction in {SPECT} Imaging},
    	Volume = {56},
    	Year = {2009}
    }
  • Schumacher, H.: Bewegungskorrektur in SPECT-Aufnahmen 2009
    BibTeX
    @phdthesis{2009-PhD-Schumacher,
      Author = {Hanno Schumacher},
      Title = {Bewegungskorrektur in SPECT-Aufnahmen},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2009},
    }
    
  • Pöschel, C., Modersitzki, J. and Scherzer, O.: A Variational Settingfor Volume Constrained Image Registration February, 2009
    BibTeX Datei
    @techreport{2009-TR-PMS,
      author = {P\"{o}schel, Christiane and Modersitzki, Jan and Scherzer, Otmar},
      title = {A Variational Settingfor Volume Constrained Image Registration },
      institution = {Joint Research Program of Industrial Geometry}, 
      year = {2009},
      month = {February},
    }
  • Heldmann, S. and Papenberg, N.: A Variational Approach for Volume-to-Slice Registration in SSVM `09: Proceedings of the Second International Conference on Scale Space and Variational Methods in Computer Vision, vol. 5567, pp. 624-635, Springer Berlin/ Heidelberg, LNCS, 2009
    BibTeX Link Datei
    @ARTICLE{2009-SSVM-HP,
      author = {Heldmann, Stefan and Papenberg, Nils},
      title = {A Variational Approach for Volume-to-Slice Registration},
      booktitle= {SSVM '09: Proceedings of the Second International Conference on Scale Space and Variational Methods in Computer Vision},
      Series = {LNCS}
      volume = {5567},
      year = {2009},
      location={Voss, Norway},
      publisher={Springer Berlin/ Heidelberg},
      pages = {624-635},
      DOI={10.1007/978-3-642-02256-2_52},
      ISBN={978-3-642-02255-5},
    }
  • Haber, E., Heldmann, S. and Modersitzki, J.: A Scale-Space Approach to Landmark Constrained Image Registration in Proceedings of the Second International Conference on Scale Space Methods and Variational Methods in Computer Vision (SSVM), pp. 1-12, Springer LNCS, 2009
    BibTeX Datei
    @INPROCEEDINGS{2009-SSVM-HHM,
      author = {Haber, Eldad and Heldmann, Stefan and Modersitzki, Jan},
      title = {A Scale-Space Approach to Landmark Constrained Image Registration},
      booktitle = {Proceedings of the Second International Conference on Scale Space Methods and  
                   Variational Methods in Computer Vision (SSVM)},
      year = {2009},
      pages = {1-12},
      alteditor = {B de Moor and B Motmans},
      publisher = {Springer LNCS},
    }
  • Heldmann, S. and Papenberg, N.: A Scale-Space Approach for Image Registration of Vessel Structures Bildverarbeitung für die Medizin, pp. 137-141, Springer, Informatik aktuell, 2009
    BibTeX Link Datei
    @conference{2009-BVM-HP,
      author = {Heldmann, Stefan and Papenberg, Nils},
      title = {A Scale-Space Approach for Image Registration of Vessel Structures},
      journal = {Bildverarbeitung f\"{u}r die Medizin},
      Series = {Informatik aktuell},
      Xvolume = {7},
      year = {2009},
      publisher={Springer},
      pages = {137-141},
      DOI={10.1007/978-3-540-93860-6_28},
    }
  • Barendt, S., Fischer, B. and Modersitzki, J.: A Kernel Representation for Exponential Splines with Global Tension in Proceedings of the SPIE 2009, Image Processing: Algorithms and Systems VII, San Jose, vol. 7245, no. 1, pp. 72450I, SPIE, 2009
    BibTeX Link Link Datei
    @INPROCEEDINGS{2009-SPIE-BMF, 
      author = {Barendt, Sven and Fischer, Bernd and  Modersitzki, Jan},
      editor = {Jaakko T. Astola and Karen O. Egiazarian and Nasser M. Nasrabadi and Syed A. Rizvi},
      title = {A Kernel Representation for Exponential Splines with Global Tension},
      publisher = {SPIE},
      year = {2009},
      volume = {7245},
      number = {1},
      eid = {72450I},
      numpages = {10},
      pages = {72450I},
      url = {http://link.aip.org/link/?PSI/7245/72450I/1},
      doi = {10.1117/12.810219},   
      note = {Accepted for publication},
      booktitle = {Proceedings of the SPIE 2009, Image Processing: Algorithms and Systems VII, 
      San Jose},
    }
  • Haber, E., Heldmann, S. and Modersitzki, J.: A Framework for Image-Based Constrained Registration with an Application to Local Rigidity Linear Algebra and its Applications, vol. 431, pp. 459-470, 2009
    BibTeX Datei
    @ARTICLE{2009-LAA-HHM,
      author = {Haber, Eldad and Heldmann, Stefan and Modersitzki, Jan},
      title = {A Framework for Image-Based Constrained Registration with an Application to Local Rigidity},
      journal = {Linear Algebra and its Applications},
      volume = {431},
      year = {2009},
      pages = {459-470},
     }
  • Lange, T., Papenberg, N., Heldmann, S., Modersitzki, J., Fischer, B. and Schlag, P. M.: 3D Ultrasound-CT Alignment of the Liver using Combined Landmark-Intensity Registration International Journal of Computer Assisted Radiology and Surgery, vol. 4, no. 1, pp. 79-88, 2009
    BibTeX Datei
    @article{LangeEtAl2009,
    	Author = {Lange, Thomas and Papenberg, Nils and Heldmann, Stefan and Modersitzki, Jan and Fischer, Bernd and Schlag, Peter M.},
    	Journal = {International Journal of Computer Assisted Radiology and Surgery},
    	Number = {1},
    	Pages = {79--88},
    	Title = {3D Ultrasound--{CT} Alignment of the Liver using Combined Landmark--Intensity Registration},
    	Volume = {4},
    	Year = {2009}}
    

2008

  • Saering, D.: Segmentierung und Interpolation von 4D-MRT-Bildsequenzen zur Funktionsanalyse des linken Ventrikels 2008
    BibTeX
    @phdthesis{2008-PhD-Saering,
      Author = {Dennis Saering},
      Title = {Segmentierung und Interpolation von 4D-MRT-Bildsequenzen zur Funktionsanalyse des linken Ventrikels},
      School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
      Year = {2008},
    }
  • Kabus, S., Müller, F., Wiemker, R. and Fischer, B.: Robust Lung Nodule Growth Measurement by Combining Registration and Segmentation in The First International Workshop on Pulmonary Image Analysis, MICCAI, pp. 15-23, 2008
    BibTeX Datei
    @conference{2008-MICCAI-KMWB,
    	Author = {Kabus, Sven and M{\"u}ller, Florian and Wiemker, Rafael and Fischer, Bernd},
    	Booktitle = {The First International Workshop on Pulmonary Image Analysis, MICCAI},
    	Editor = {M. Brown and M. de Bruijne and B. van Ginneken and A. Kiraly and J.-M. Kuhnigk and C. Lorenz and K. Mori and J.M. Reinhardt},
    	Pages = {15--23},
    	Title = {Robust Lung Nodule Growth Measurement by Combining Registration and Segmentation},
    	Year = {2008}
    }
  • Papenberg, N., Modersitzki, J. and Fischer, B.: Registrierung im Fokus vol. 7, pp. 138-142, Springer Berlin / Heidelberg, Informatik aktuell, 2008
    BibTeX Link Datei
    @conference{2008-BVM-PMF,
      author = {Papenberg, Nils and Modersitzki, Jan and Fischer, Bernd},
      title = {{R}egistrierung im {F}okus: {B}eschleunigung {V}ariationeller {M}ethoden f\"{u}r die {B}ildregistrierung},
      book={{B}ildverarbeitung f\"{u}r die {M}edizin},
      Editor = {T. Toldoff and J. Braun and T.M. Deserno and H. Handels and A. Horsch and {H.-P. Meinzer}},
      volume = {7},
      year = {2008},
      publisher={Springer Berlin / Heidelberg},
      pages = {138-142},
      Title = {Registrierung im Fokus},
      Series = {Informatik aktuell},
      DOI={10.1007/978-3-540-78640-5},
      ISSN={1431-472X},
      ISBN={978-3-540-78639-9 (Print), 978-3-540-78640-5 (Online)},
    }
  • Fischer, B., Haber, E. and Moderstitzki, J.: Mathematics Meets Medicine, an Optimal Alignment SIAG/OPT Views and News, vol. 19, no. 2, pp. 1-7, 2008
    BibTeX Datei
    @ARTICLE{2008-SIAG-FHM,
      author = {Fischer, Bernd and Haber, Eldad and Moderstitzki, Jan},
      title = {Mathematics Meets Medicine, an Optimal Alignment},
      journal = {SIAG/OPT Views and News},
      volume = {19},
      number={2},
      year = {2008},
      pages = {1-7},
    }
  • Schumacher, H., Heldmann, S., Haber, E. and Fischer, B.: Iterative Reconstruction of SPECT Images using Adaptive Multil-Level Refinement in Bildverarbeitung für die Medizin 2008, pp. 318 - 323, Springer, Informatik aktuell, 2008
    BibTeX Datei
    @inproceedings{2008-BVM-SHHF,
    	Author = {Schumacher, Hanno and Heldmann, Stefan and Haber, Eldad and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2008},
    	Title = {Iterative Reconstruction of SPECT Images using Adaptive Multil-Level Refinement},
    	Year = {2008}}
    	Editor = {T. Tolxdoff and J. Braun and T.M. Deserno and H. Handels and A. Horsch and {H.-P. Meinzer}},
    	Pages = {318 -- 323},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Year = {2008}
    	ISBN={ 978-3-540-78639-9},
    }
  • Papenberg, N., Lange, T., Modersitzki, J., Schlag, P. M. and Fischer, B.: Image Registration for CT and Intra-operative Ultrasound Data of the Liver in Medical Imaging 2008: Image Processing, vol. 6918, pp. 1-5, SPIE, 2008
    BibTeX Link Datei
    @conference{2008-SPIE-PLMSF,
      author = {Papenberg, Nils, and Lange, Thomas and Modersitzki, Jan and Schlag, Peter M. and Fischer, Bernd},
      title = {Image Registration for {CT} and Intra-operative Ultrasound Data of the Liver},
      Booktitle = {Medical Imaging 2008: Image Processing},
      editor = {MI Miga and KR Cleary},  
      volume = {6918},
      publisher = {SPIE},
      year = {2008},
      pages = {1-5},
      DOI={10.1117/12.770105},
    }
  • Moderstitzki, J. and Fischer, B.: Ill-posed Medicine‚ an Introduction to Image Registration Inverse Problems, vol. 24, no. 3, pp. 1-19, 2008
    BibTeX Link Datei
    @ARTICLE{2008-IP-FM,
      author = {Moderstitzki, Jan and Fischer, Bernd},
      title = {Ill-posed Medicine‚ an Introduction to Image Registration},
      journal = {Inverse Problems},
      volume = {24},
      number={3}
      year = {2008},
      pages = {1-19},
      DOI={10.1088/0266-5611/24/3/034008},
    }
  • Modersitzki, J.: FLIRT with Rigidity‚Image Registration with a Local Non-rigidity Penalty International Journal of Computer Vision, pp. 153-163, Springer Netherlands, 2008
    BibTeX Link Datei
    @ARTICLE{2007-IJCV-M,
      author = {Modersitzki, Jan},
      title = {FLIRT with Rigidity‚Image Registration with a Local Non-rigidity Penalty},
      journal = {International Journal of Computer Vision},
      Xvolume = {76},
      Xnumber={2},
      year = {2008},
      publisher={Springer Netherlands},
      pages = {153-163},
      DOI={10.1007/s11263-007-0079-3},
      ISSN={0920-5691 (Print) 1573-1405 (Online)},
    }
  • Modersitzki, J.: FAIR - Flexible Algorithms for Image Registration 2008
    BibTeX
    @MISC{2008-P-FAIR,
      author =       {Jan Modersitzki},
      title =        {{FAIR} -- {F}lexible {A}lgorithms for {I}mage {R}egistration},
      howpublished = {\newline\url{http://www.mic.uni-luebeck.de/people/jan-modersitzki/software/fair.html}},
      year =         {2008},
    }
  • Papenberg, N.: Ein genereller Registrierungsansatz mit Anwendung in der navigierten Leberchirurgie 2008
    BibTeX
    @phdthesis{2008-PhD-Papenberg,
      Author = {Nils Papenberg},
      Title = {Ein genereller Registrierungsansatz mit Anwendung in der navigierten Leberchirurgie},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2008},
    }
  • Ludwig, M., Koch, J. and Fischer, B.: An Application of the Finite Volume Method to the Bio-heat-transfer-equation in Premature Infants ETNA, vol. 28, pp. 136-148, 2008
    BibTeX Datei
    @article{2008-ETNA-LKF,
    	Author = {Ludwig, Martin and Koch, Jochim and Fischer, Bernd},
    	Journal = {ETNA},
    	Pages = {136--148},
    	Title = {An Application of the Finite Volume Method to the Bio-heat-transfer-equation in Premature Infants},
    	Volume = {28},
    	Year = {2008}
    }
  • Haber, E., Heldmann, S. and Modersitzki, J.: Adaptive Mesh Refinement for Nonparametric Image Registration SIAM Journal on Scientific Computing, vol. 30, no. 6, pp. 3012-3027, SIAM, 2008
    BibTeX Link Link Datei
    @ARTICLE{2008-SIAM-HHM,
      author = {Haber, Eldad and Heldmann, Stefan and Modersitzki, Jan},
      title = {Adaptive Mesh Refinement for Nonparametric Image Registration},
      journal = {SIAM Journal on Scientific Computing},
      volume = {30},
      number={6},
      year = {2008},
      publisher={SIAM},
      pages = {3012-3027},
      DOI={10.1137/070687724},
      url = {http://link.aip.org/link/?SCE/30/3012},
    }
  • Ens, K., von Berg, J., Kabus, S., Lorenz, C. and Fischer, B.: A Unified Framework for Joint Registration and Segmentation in Medical Imaging 2008: Image Processing, vol. 6914, 691406, 2008
    BibTeX Datei
    @conference{2008-SPIE-EBKLF,
    	Author = {Ens, Konstantin and von Berg, Jens and Kabus,  Sven and Lorenz,  Cristian and Fischer, Bernd},
    	Booktitle = {Medical Imaging 2008: Image Processing},
    	Editor = {J.P.W. Pluim and J.M. Reinhardt},
    	Organization = {SPIE},
    	Title = {A Unified Framework for Joint Registration and Segmentation},
    	Volume = {6914, 691406},
    	Year = {2008}
    }
  • Ens, K., von Berg, J. and Bernd, F.: A Communication Term for the Combined Registration and Segmentation in ECIFMBE 2008- IFMBE Proceedings, vol. 22, pp. 673-675, IFMBE Proceedings, 2008
    BibTeX Link Datei
    @conference{2008-IFMBE-EBF,
    	Author = {Ens, Konstantin and von Berg, Jens and Bernd, Fischer},
    	Booktitle = {ECIFMBE 2008- IFMBE Proceedings},
    	Editor = {J. Vander Sloten and P. Verdonck and M. Nyssen and J. Haueisen},
    	Pages = {673--675},
    	Publisher = {IFMBE Proceedings},
    	Title = {A Communication Term for the Combined Registration and Segmentation},
    	Volume = {22},
    	Year = {2008}
    	DOI={10.1007/978-3-540-89208-3_160},
    }
  • Lange, T., Papenberg, N., Heldmann, S., Modersitzki, J., Fischer, B. and Schlag, P. M.: 3D Ultrasound-CT Alignment of the Liver using Combined Landmark-Intensity Registration in Internationnal Conference on Computer Assisted Radiology and Surgery 2008 (CARS `08), 2008
    BibTeX Datei
    @inproceedings{2008-CARS-LPHMFLS,
    	Author = {Lange, Thomas and Papenberg, Nils and Heldmann, Stefan and Modersitzki, Jan and Fischer, Bernd and Schlag, Peter M.},
    	Booktitle = {Internationnal Conference on Computer Assisted Radiology and Surgery 2008 (CARS '08)},
    	Title = {{3D Ultrasound--CT Alignment of the Liver using Combined Landmark--Intensity Registration}},
    	Year = {2008}}
    

2007

  • Schumacher, H., Ens, K., Franz, A. and Fischer, B.: Wahl eines gewichteten Distanzmaßes für monomodale Bilder in der nicht- parametrischen Registrierung in Bildverarbeitung für die Medizin 2007, pp. 146-150, Springer, Informatik aktuell, 2007
    BibTeX Link Datei
    @conference{2007-BVM-SEFF,
    	Author = {Schumacher, Hanno and Ens, Konstantin and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2007},
    	Editor = {A. Horsch and T.M. Deserno and H. Handels and {H.-P. Meinzer} and T. Tolxdoff},
    	Pages = {146--150},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {{W}ahl eines gewichteten {D}istanzmaßes f{\"u}r monomodale {B}ilder in der nicht-	parametrischen {R}egistrierung},
    	Year = {2007}
    	DOI={10.1007/978-3-540-71091-2_30},
    	ISBN={978-3-540-71090-5},
    }
  • Kabus, S., Franz, A. and Fischer, B.: Variational Image Registration Allowing for Discontinuities in the Displacement Field in Image Processing Based on Partial Differential Equations, pp. 363-377, Springer, Mathematics and Visualization, 2007
    BibTeX Link Datei
    @conference{2007-CMA-KFF,
    	Author = {Kabus,Sven and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Image Processing Based on Partial Differential Equations},
    	Editor = {X.-C. Tai and K.-A. Lie and T.F. Chan and S. Osher},
    	Pages = {363--377},
    	Publisher = {Springer},
    	Series = {Mathematics and Visualization},
    	Title = {Variational Image Registration Allowing for Discontinuities in the Displacement Field},
    	Year = {2007}
    	DOI={10.1007/978-3-540-33267-1_20},
    }
  • Peters, A., Conrad, M., Hubold, C., Schweiger, U., Fischer, B. and Fehm, H. L.: The Principle of Homeostasis in the Hypothalamus-Pituitary-Adrenal System: New Insight from Positive Feedback Am J Physiol Regulatory Integrative Comp Physiol, vol. 293, pp. 83-98, 2007
    BibTeX Link Datei
    @article{2007-AJPRICP-PCHSFF,
    	Author = {Peters, Achim and Conrad, Matthias and Hubold, Christian and Schweiger, Ulrich and Fischer, Bernd and Fehm, Horst Lorenz },
    	Journal = {Am J Physiol Regulatory Integrative Comp Physiol},
    	Pages = {83-98},
    	Title = {The Principle of Homeostasis in the Hypothalamus-Pituitary-Adrenal System: New Insight from Positive Feedback},
    	Volume = {293},
    	Year = {2007}
    	DOI={10.1152/ajpregu.00907.2006 },
    }
  • Kabus, S., Franz, A. and Fischer, B.: Spatially Varying Elasticity in Image Registration Methods of Information in Medicine, vol. 46, no. 3, pp. 287-291, 2007
    BibTeX Link Datei
    @article{2007-MIM-KFF,
    	Author = {Kabus, Sven and Franz, Astrid and Fischer, Bernd},
    	Journal = {Methods of Information in Medicine},
    	Number = {3},
    	Pages = {287--291},
    	Title = {Spatially Varying Elasticity in Image Registration},
    	Volume = {46},
    	Year = {2007}
    	DOI={10.1160/ME9045},
    	ISSN={0026-1270},
    }
  • Haber, E. and Modersitzki, J.: Intensity Gradient Based Registration and Fusion of Multi-modal Images Methods of Information in Medicine, vol. 46, no. 3, pp. 292-299 publisjerSchattauer Verlag, Stuttgart, 2007
    BibTeX
    @ARTICLE{2007-MIM-HM, 
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Intensity Gradient Based Registration and Fusion of Multi-modal Images},
      journal = {Methods of Information in Medicine},
      volume = {46},
      number={3},
      pages = {292--299},
      publisjer{Schattauer Verlag, Stuttgart},
      year = {2007},
    }
  • Ens, K., Schumacher, H., Franz, A. and Fischer, B.: Improved Elastic Medical Image Registration Using Mutual Information in Medical Imaging 2007: Image Processing, vol. 6512, 65122C, SPIE, 2007
    BibTeX Link Datei
    @conference{2007-SPIE-ESFF,
    	Author = {Ens, Konstantin and Schumacher, Hanno and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Medical Imaging 2007: Image Processing},
    	Editor = {J.P.W. Pluim and J.M. Reinhardt},
    	Location = {San Diego, CA, USA},
    	Publisher = {SPIE},
    	Title = {Improved Elastic Medical Image Registration Using Mutual Information},
    	Volume = {6512, 65122C},
    	Year = {2007}
    	Url = {http://link.aip.org/link/?PSI/6512/65122C/1},
    	Bdsk-Url-1 = {http://link.aip.org/link/?PSI/6512/65122C/1},
    	Bdsk-Url-2 = {http://dx.doi.org/10.1117/12.707632}}
    }
  • Modersitzki, J.: Image Registration with Local Rigidity Constraints vol. 5, pp. 444-448, Springer Berlin/ Heidelberg, 2007
    BibTeX Link Datei
    @conference{2007-BVM-M, 
      author = {Modersitzki, Jan},
      title = {Image Registration with Local Rigidity Constraints},
      book={Bildverarbeitung f\"{u}r die Medizin},
      editor= {A. Horsch, TM. Deserno, H. Handels, HP. Meinzer, and T. Tolxdoff},
      volume = {5},
      year = {2007},
      publisher={Springer Berlin/ Heidelberg},
      pages = {444-448},
      DOI={10.1007/978-3-540-71091-2},
      ISSN={1431-472X},
      ISBN={978-3-540-71090-5 (Print), 978-3-540-71091-2 (Online)},
    }
  • Schmitt, O., Modersitzki, J., Heldmann, S., Wirtz, S. and Fischer, B.: Image Registration of Sectioned Brains International Journal of Computer Vision, vol. 73, no. 1, pp. 5-39, Springer Netherlands, 2007
    BibTeX Link Datei
    @ARTICLE{2007-IJCV-SMHWF,
      author = {Schmitt, Oliver and Modersitzki, Jan and Heldmann, Stefan and Wirtz, Stefen and Fischer, Bernd},
      title = {Image Registration of Sectioned Brains },
      journal = {International Journal of Computer Vision },
      volume = {73},
      number={1},
      year = {2007},
      publisher={Springer Netherlands},
      pages = {5-39},
      DOI={10.1007/s11263-006-9780-x},
      ISSN={0920-5691 (Print), 1573-1405 (Online)},
    }
  • Barendt, S., Fischer, B. and Modersitzki, J.: Ein numerisches Verfahren zur Kalibrierung von Gammakameras pp. 449-453, Springer Berlin / Heidelberg, Informatik aktuell, 2007
    BibTeX Link Datei
    @conference{2007-BVM-BFM,
      author = {Barendt, Sven and Fischer, Bernd and Modersitzki, Jan},
      title = {{E}in numerisches {V}erfahren zur {K}alibrierung von {G}ammakameras},
      book = {{B}ildverarbeitung f\"{u}r die {M}edizin 2007},
      Editor = {A. Horsch and T.M. Deserno and H. Handels and {H.-P. Meinzer} and T. Tolxdoff},
      year = {2007},
      publisher={Springer Berlin / Heidelberg},
      pages = {449-453},
      Series = {Informatik aktuell},
      DOI = {10.1007/978-3-540-71091-2},
      ISSN={1431-472X},
      ISBN={978-3-540-71090-5(Print), 978-3-540-71091-2 (Online)},
    } 
  • Schumacher, H., Modersitzki, J. and Fischer, B.: Combined Reconstruction and Motion Correction in SPECT Imaging 2007
    BibTeX
    @TECHREPORT{2007-TR-SMF,
      author = {Schumacher, Hanno and Modersitzki, Jan and  Fischer, Bernd},
      title = {Combined Reconstruction and Motion Correction in {SPECT} Imaging},
      institution = {Institute of Mathematics, University of L\"ubeck, Germany},
      year = {2007},
      type = {Preprint A-07-04},
      note = {Accepted for publication in the SPIE Proceedings on Medical Imaging},
    }
  • Haber, E. and Modersitzki, J.: Cofir: Coarse and Fine Image Registration SIAM Real-Time PDE-Constrained Optimization, pp. 37-49, SIAM, Philadelphia, 2007
    BibTeX Datei
    @ARTICLE{2007-SIAM-HM, 
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Cofir: Coarse and Fine Image Registration },
      journal = {SIAM Real-Time PDE-Constrained Optimization},
      editor = {LT Biegler and O Ghattas and M Heinkenschloss and D Keyes and B van Bloemen Waanders},
      year = {2007},
      publisher={SIAM, Philadelphia},
      pages = {37-49},
    }
  • Röhl, E., Schumacher, H. and Fischer, B.: Automatic Detection of Abrupt Patient Motion in SPECT Data Acquisition in Medical Imaging 2007: Image Processing, vol. 6512, 65120C, SPIE, 2007
    BibTeX Datei
    @conference{2007-SPIE-RSF,
    	Author = {R{\"o}hl, Elisabeth and Schumacher, Hanno and Fischer, Bernd},
    	Booktitle = {Medical Imaging 2007: Image Processing},
    	Editor = {J.P.W. Pluim and J.M. Reinhardt},
    	Publisher = {SPIE},
    	Title = {Automatic Detection of Abrupt Patient Motion in {SPECT} Data Acquisition},
    	Volume = {6512, 65120C},
    	Year = {2007}
    }
  • Haber, E. and Heldmann, S.: An OcTree Multigrid Method for Quasi-Static Maxwell’s Equations with Highly Discontinuous Coefficients Journal of Computational Physics, pp. 783-796, Elsevier Inc, 2007
    BibTeX Link Datei
    @ARTICLE{2007-JCP-HH,
      author = {Haber, Eldad and Heldmann, Stefan},
      title = {An OcTree Multigrid Method for Quasi-Static Maxwell’s Equations with Highly
      Discontinuous Coefficients },
      journal = {Journal of Computational Physics},
      Xvolume = {223},
      Xnumber = {2},
      year = {2007},
      publisher={Elsevier Inc},
      pages = {783-796},
      DOI={10.1016/j.jcp.2006.10.012 },
     }
  • Haber, E., Heldmann, S. and Modersitzki, J.: An OcTree Method for Parametric Image Registration SIAM Journal on Scientific Computing, vol. 29, no. 5, pp. 2008-2023, SIAM, 2007
    BibTeX Link Link Datei
    @ARTICLE{2007-SIAM-HHM,
      author = {Haber, Eldad and Heldmann, Stefen and Modersitzki, Jan },
      title = {An OcTree Method for Parametric Image Registration },
      journal = {SIAM Journal on Scientific Computing},
      volume = {29},
      number={5},
      year = {2007},
      publisher={SIAM},
      pages = {2008-2023},
      DOI={10.1137/060662605},
      url = {http://link.aip.org/link/?SCE/29/2008/1},
    }
  • Haber, E., Heldmann, S. and Ascher, U.: Adaptive Finite Volume Method for Distributed Non-smooth Parameter Identification Inverse Problems, pp. 1659-1676, 2007
    BibTeX Link
    @ARTICLE{2007-IP-HHA,
      author = {Haber, Eldad and Heldmann, Stefan and Ascher, Uri},
      title = {Adaptive Finite Volume Method for Distributed Non-smooth Parameter Identification},
      journal = {Inverse Problems},
      Xvolume = {23},
      Xnumber = {4},
      year = {2007},
      pages = {1659-1676},
      DOI={10.1088/0266-5611/23/4/017},
    }
  • Schumacher, H. and Fischer, B.: A New Flexible Reconstruction Framework for Motion Correction in SPECT Imaging IEEE Transactions on Nuclear Science, vol. 54, pp. 480-485, 2007
    BibTeX Link Datei
    @article{2007-ITNS-SF,
    	Author = {Schumacher, Hanno and Fischer, Bernd},
    	Journal = {IEEE Transactions on Nuclear Science},
    	Pages = {480-485},
    	Title = {A New Flexible Reconstruction Framework for Motion Correction in {SPECT} Imaging},
    	Volume = {54},
    	Year = {2007}
    	DOI={10.1109/TNS.2007.896211 },
    	ISSN={0018-9499 },
    }
  • Schumacher, H. and Fischer, B.: A new Approach for Motion Correction in SPECT Imaging in Bildverarbeitung für die Medizin 2007, pp. 51-55, Springer, Informatik aktuell, 2007
    BibTeX Link Datei
    @conference{2007-BVM-SF,
    	Author = {Schumacher, Hanno and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2007},
    	Editor = {A. Horsch and T.M. Deserno and H. Handels and {H.-P. Meinzer} and T. Tolxdoff},
    	Pages = {51-55},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {A new Approach for Motion Correction in {SPECT} Imaging},
    	Year = {2007}
    	DOI={10.1007/978-3-540-71091-2_11},
    	ISBN={978-3-540-71090-5},
    }
  • Papenberg, N., Schumacher, H., Heldmann, S., Wirtz, S., Bommersheim, S., Ens, K., Modersitzki, J. and Fischer, B.: A Fast and Flexible Image Registration Toolbox: Design and Implementation of the General Approach vol. 5, pp. 106-110, Springer Berlin/ Heidelberg, Informatik aktuell, 2007
    BibTeX Link Datei
    @conference{2007-BVM-FLIRT,
      author = {Papenberg, Nils and Schumacher, Hanno and Heldmann, Stefan and Wirtz, Stefan and Bommersheim, Silke and Ens, Konstantin and Modersitzki, Jan and Fischer, Bernd},
      title = {A Fast and Flexible Image Registration Toolbox: Design and Implementation of the General Approach},
      book= {Bildverarbeitung f\"{u}r die Medizin 2007},
      Series = {Informatik aktuell},
      Editor = {A. Horsch and T.M. Deserno and H. Handels and {H.-P. Meinzer} and T. Tolxdoff},
      volume = {5},
      year = {2007},
      publisher={Springer Berlin/ Heidelberg},
      pages = {106-110},
      DOI={10.1007/978-3-540-71091-2},
      ISSN={1431-472X},
      ISBN={978-3-540-71090-5 (Print), 978-3-540-71091-2 (Online)},
    }

2006

  • Schumacher, H., Franz, A. and Fischer, B.: Weighted Medical Image Registration with Automatic Mask Generation in Medical Imaging 2006: Image Processing, vol. 6144, 61442B, SPIE, 2006
    BibTeX Link Datei
    @inproceedings{2006-SPIE-SFF,
    	Author = {Schumacher, Hanno and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Medical Imaging 2006: Image Processing},
    	Editor = {J.M. Reinhardt, J.P.W. Pluim},
    	Publisher = {SPIE},
    	Title = {Weighted Medical Image Registration with Automatic Mask Generation},
    	Volume = {6144, 61442B},
    	Year = {2006}
    	DOI={10.1117/12.651323},
    }
  • Kabus, S., Franz, A. and Fischer, B.: Variational Image Registration with Local Properties in Biomedical Image Registration (WBIR 2006), pp. 92-100, Springer, LNCS 4057, 2006
    BibTeX Link Datei
    @conference{2006-WBIR-KFF,
    	Author = {Kabus, Sven and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Biomedical Image Registration (WBIR 2006)},
    	Editor = {J.P.W. Pluim and B. Likar and F.A. Gerritsen},
    	Pages = {92--100},
    	Publisher = {Springer},
    	Series = {LNCS 4057},
    	Title = {Variational Image Registration with Local Properties},
    	Year = {2006}
    	DOI={10.1007/11784012_12},
    	ISBN={3-540-35648-7},
    }
  • Schmitt, O., Modersitzki, J. and Wirtz, S.: Registration of Histological Serial Sectionings vol. 10, pp. 63-80, Springer Berlin / Heidelberg, 2006
    BibTeX Link Datei
    @ARTICLE{2006-MMRAMI-MSW,
      author = {Schmitt, Oliver and Modersitzki, Jan and Wirtz, Stefen},
      title = {Registration of Histological Serial Sectionings},
      book={Mathematical Models for Registration and Applications to Medical Imaging},
      volume = {10},
      year = {2006},
      publisher={Springer Berlin / Heidelberg},
      pages = {63-80},
      DOI={10.1007/978-3-540-34767-5},
      ISSN={1612-3956},
      ISBN={978-3-540-25029-6 (Print), 978-3-540-34767-5 (Online)},
    }
  • Modersitzki, J. and Wirtz, S.: Registration of Histological Serial Sectionings in Mathematical Models for Registration and Applications to Medical Imaging. Mathematics in Industry, Springer, New York, 2006
    BibTeX
    @inproceedings{2006-MMRAMI-WM,
        author = {Modersitzki, Jan and Wirtz, Stefan},
         title = {Registration of Histological Serial Sectionings},
        editor = {Otmar Scherzer},
      booktitle = {Mathematical Models for Registration and Applications
                   to Medical Imaging. Mathematics in Industry},
          year = {2006},
     publisher = {Springer},
       address = {New York},
    }
  • Bommersheim, S. and Fischer, B.: Non-rigid Image Registration in Proceedings of the 9th Korea-Germany joint workshop on Advanced Medical Image Processing, pp. 81-89, Seoul, 2006
    BibTeX Datei
    @inproceedings{2006-KOREA-BF, 
    	Address = {Seoul},
    	Author = {Bommersheim, Silke and Fischer, Bernd},
    	Booktitle = {Proceedings of the 9th Korea-Germany joint workshop on Advanced Medical Image Processing},
    	Pages = {81--89},
    	Title = {Non-rigid Image Registration},
    	Year = {2006}
    }
    
  • Heldmann, S.: Non-Linear Registration based on Mutual Information 2006
    BibTeX
    @phdthesis{2006-PhD-Heldmann,
    	Author = {Heldmann, Stefan},
    	School = {Institute of Mathematics, University of L\"ubeck},
    	Title = {Non-Linear Registration based on Mutual Information},
    	ISBN= {978-3-8325-1481-5},
    	Year = {2006},
    }
  • Kabus, S.: Multiple-Material Variational Image Registration 2006
    BibTeX
    @phdthesis{2006-PhD-Kabus,
      Author = {Sven Kabus},
      Title = {Multiple-Material Variational Image Registration},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2006},
    }
  • Conrad, M.: Modellierung und Parameterschätzung endokriner Systeme 2006
    BibTeX
    @phdthesis{2006-PhD-Conrad,
      Author = {Matthias Conrad},
      Title = {Modellierung und Parametersch\"atzung endokriner Systeme},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2006},
    }
    
  • Bommersheim, S. and Fischer, B.: Mathematik und Medizin - die Fusion zweier Welten FOCUS MUL, vol. 23, no. 4, pp. 196-201, 2006
    BibTeX Datei
    @article{2006-FOCUS-BF,
    	Author = {Bommersheim,Silke and Fischer, Bernd},
    	Journal = {FOCUS MUL},
    	Number = {4},
    	Pages = {196--201},
    	Title = {{M}athematik und {M}edizin -- die {F}usion zweier {W}elten},
    	Volume = {23},
    	Year = {2006}
    }
  • Haber, E. and Modersitzki, J.: Intensity Gradient Based Registration and Fusion of Multi-modal Images in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2006, vol. 3216, pp. 591-598, Springer LNCS, 2006
    BibTeX
    @INPROCEEDINGS{2006-MICCAI-HM,
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Intensity Gradient Based Registration and Fusion of Multi-modal Images},
      booktitle = {Medical Image Computing and Computer-Assisted Intervention -- MICCAI
    	2006},
      year = {2006},
      editor = {C Barillot and DR Haynor and P Hellier},
      volume = {3216},
      pages = {591--598},
      publisher = {Springer LNCS}
    }
  • Haber, E. and Modersitzki, J.: Image Registration with Guaranteed Displacement Regularity International Journal of Computer Vision, vol. 71, no. 3, pp. 361-372, Springer Netherlands, 2006
    BibTeX Link Datei
    @ARTICLE{2006-IJCV-HM,
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Image Registration with Guaranteed Displacement Regularity},
      journal = {International Journal of Computer Vision},
      volume = {71},
      number={3},
      year = {2006},
      publisher={Springer Netherlands},
      pages = {361-372},
      DOI={10.1007/s11263-006-8984-4},
      ISSN={0920-5691 (Print), 1573-1405 (Online)},
    }
  • Fischer, B. and Modersitzki, J.: Image Fusion and Registration - a Variational Approach in Computational Science and High Performance Computing II, vol. 91, pp. 193-205, Springer, Notes on Numerical Fluid Mechanics and Multidisciplinatory Design, 91, 2006
    BibTeX Datei
    @INPROCEEDINGS{2006-CSHPC-FM,
      author = {Fischer, Bernd and Modersitzki, Jan},
      title = {Image Fusion and Registration -- a Variational Approach},
      booktitle = {Computational Science and High Performance Computing II},
      Volume = {91},
      year = {2006},
      editor = {E Krause and YI Shokin and M Resch and N Shokina},
      series = {Notes on Numerical Fluid Mechanics and Multidisciplinatory Design, 91},
      pages = {193--205},
      publisher = {Springer},
    }
  • group, S. r.: FLIRT - A FLexible Image Registration Toolbox 2006
    BibTeX
    @MISC{2006-P-FLIRT,
      author =       {SAFIR research group},
      title =        {{FLIRT} -- A {FL}exible {I}mage {R}egistration {T}oolbox},
      howpublished = {\newline\url{http://www.math.uni-luebeck.de/safir/FLIRT-Download/index.shtml}},
      year =         {2006},
    }
  • Koch, J., Ludwig, M. and Fischer, B.: Der Wärmehaushalt des Frühgeborenen: Mathematische Modellierung und numerische Ergebnisse FOCUS MUL, vol. 23, no. 1, pp. 16-24, 2006
    BibTeX Datei
    @article{2006-FOCUS-KLF,
    	Author = {Koch, Joachim and Ludwig, Martin and Fischer, Bernd},
    	Journal = {FOCUS MUL},
    	Number = {1},
    	Pages = {16--24},
    	Title = {Der {W}{\"a}rmehaushalt des {F}r{\"u}hgeborenen: {M}athematische {M}odellierung und numerische {E}rgebnisse},
    	Volume = {23},
    	Year = {2006}
    }
  • Modersitzki, J. and Wirtz, S.: Combining Homogenization and Registration vol. 4057, pp. 257-263, Springer Berlin/ Heidelberg, 2006
    BibTeX Link Datei
    @ARTICLE{2006-BMI-MW,
      author = {Modersitzki, Jan and Wirtz, Stefen},
      title = {Combining Homogenization and Registration  },
      bbok = {Biomedical Image Registration},
      volume = {4057},
      year = {2006},
      publisher={Springer Berlin/ Heidelberg},
      pages = {257-263},
      DOI={10.1007/11784012},
      ISSN={0302-9743 (Print), 1611-3349 (Online)},
      ISBN={978-3-540-35648-6},
    }
  • Haber, E. and Modersitzki, J.: A Multilevel Method for Image Registration SIAM Journal on Scientific Computing, vol. 27, no. 5, pp. 1594-1607, SIAM, 2006
    BibTeX Datei
    @ARTICLE{2006-SIAM-HM,  
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {A Multilevel Method for Image Registration},
      journal = {SIAM Journal on Scientific Computing},
      volume = {27},
      number={5},
      year = {2006},
      publisher={SIAM},
      pages = {1594-1607},
    }
  • Hömke, L.: A multigrid method for elastic image registration with additional structural constraints 2006
    BibTeX
    @phdthesis{2006-PhD-Hoemke,
      Author = {Lars H\"omke},
      Title = {A multigrid method for elastic image registration with additional structural constraints},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2006},
    }
    

2005

  • Schmitt, O., Eggers, R. and Modersitzki, J.: Videomicroscopy, Image Processing, and Analysis of Whole Histologic Sections of the Human Brain Microscopy Research and Technique, vol. Volume 66 Issue 4, pp. 203-218, Wiley- Liss, 2005
    BibTeX Datei
    @ARTICLE{2005-MRT-SEM, 
      author = {Schmitt, Oliver and Eggers, Reinhard and Modersitzki, Jan},
      title = {Videomicroscopy, Image Processing, and Analysis of Whole Histologic Sections of the Human Brain },
      journal = {Microscopy Research and Technique},
      volume = {Volume 66 Issue 4},
      year = {2005},
      publisher={Wiley- Liss},
      pages = {203-218},
      }
  • Schmitt, O., Modersitzki, J., Heldmann, S., Wirtz, S., Hömke, L., Heide, W., Kömpf, D. and Wree, A.: Three-dimensional Cytoarchitectonic Analysis of the Posterior Bank of the Human Precentral sulcus Anatomy and Embryology, vol. Volume 210, Numbers 5-6, pp. 387-400, Springer Berlin / Heidelberg, 2005
    BibTeX Link Datei
    @ARTICLE{2005-AE-SMHWHHKW,
      author = {Schmitt, Oliver and Modersitzki, Jan and Heldmann, Stefan and Wirtz, Stefen and H\"{o}mke, L and Heide, W and K\"{o}mpf, D and Wree, A },
      title = {Three-dimensional Cytoarchitectonic Analysis of the Posterior Bank of the Human Precentral sulcus},
      journal = {Anatomy and Embryology},
      volume = {Volume 210, Numbers 5-6},
      year = {2005},
      publisher={Springer Berlin / Heidelberg},
      pages = {387-400},
      DOI={10.1007/s00429-005-0030-8},
      ISSN={0340-2061 (Print), 1432-0568 (Online)},
    }
  • Wirtz, S., Papenberg, N., Fischer, B. and Schmitt, O.: Robust and Staining-Invariant Elastic Registration of a Series of Images from Histologic Slices in Medical Imaging 2005: Image Processing, vol. 5747, pp. 1256-1262, SPIE, 2005
    BibTeX Datei
    @inproceedings{2005-SPIE-WPFS,
    	Author = {Wirtz, Stefan and Papenberg, Nils and Fischer, Bernd and Schmitt, Oliver},
    	Booktitle = {Medical Imaging 2005: Image Processing},
    	Editor = {J.M. Fitzpatrick and J.M. Reinhardt},
    	Pages = {1256--1262},
    	Publisher = {SPIE},
    	Title = {Robust and Staining-Invariant Elastic Registration of a Series of Images from Histologic Slices},
    	Volume = {5747},
    	Year = {2005}
    }
  • Bolten, M., Papenberg, N., Fischer, B., Adamidis, P., Rabenseifner, R. and Berger, H.: Parallelisierung eines Nichtlinearen Registrierungsalgorithmus zur Verarbeitung sehr großer Volumen-Daten in Bildverarbeitung für die Medizin 2005, pp. 360-364, Springer, Informatik aktuell, 2005
    BibTeX
    @inproceedings{2005-BVM-BPFARB,
    	Author = {Bolten, Matthias and Papenberg, Nils and Fischer, Bernd and Adamidis, Panagiotis and Rabenseifner, Rolf and Berger, Holger},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2005},
    	Editor = {H.-P. Meinzer and H. Handels and A. Horsch and T. Tolxdorff},
    	Pages = {360--364},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {{P}arallelisierung eines {N}ichtlinearen {R}egistrierungsalgorithmus zur {V}erarbeitung sehr großer {V}olumen-{D}aten},
    	Year = {2005}
    }
  • Kabus, S., Franz, A. and Fischer, B.: On Elastic Image Registration with Varying Material Parameters in Bildverarbeitung für die Medizin 2005, pp. 330-334, Springer, Informatik aktuell, 2005
    BibTeX
    @conference{2005-BVM-KFF,
    	Author = {Kabus, Sven and Franz, Astrid and Fischer, Bernd},
    	Booktitle = {Bildverarbeitung f{\"u}r die Medizin 2005},
    	Editor = {H.-P. Meinzer and H. Handels and A. Horsch and T. Tolxdorff},
    	Pages = {330--334},
    	Publisher = {Springer},
    	Series = {Informatik aktuell},
    	Title = {On Elastic Image Registration with Varying Material Parameters},
    	Year = {2005}
    }
  • Hofmann, U., Knopp, U., Fischer, B. and Modersitzki, J.: Navigationshilfsvorrichtung für Neurochirurgische Eingriffe am Menschlichen Gehirn Feb., 2005
    BibTeX
    @MANUAL{2005-P-NAVI,
      TITLE =        {{N}avigationshilfsvorrichtung f\"{u}r {N}eurochirurgische {E}ingriffe am {M}enschlichen Gehirn},
      author =       {Hofmann, Ulrich and Knopp, Ulrich and Fischer, Bernd and Modersitzki, Jan},
      organization = {Deutsches  Patentamt},
      Howpublished = {DE 10242802.6},
      note =         {AZ 10242 802},
      year = {2005},
      month = {Feb.},
    }
  • Ludwig, M.: Ein Finite-Volumen-Verfahren zur numerischen Simulation der Temperaturverteilungen in Frühgeborenen 2005
    BibTeX
    @phdthesis{2005-PhD-Ludwig,
      Author = {Martin Ludwig},
      Title = {Ein Finite-Volumen-Verfahren zur numerischen Simulation der Temperaturverteilungen in Fr\"uhgeborenen},
      School = {Institute of Mathematics, University of L\"ubeck},
      Year = {2005},
    }
    
  • Faber, T., Modersitzki, J., Folks, R. and Garcia, E.: Detecting Changes in Serial Myocardial Perfusion SPECT: A Simulation Study Journal of Nuclear Cardiology, vol. 12, no. 3, pp. 302-310, 2005
    BibTeX Link
    @ARTICLE{2005-JNC-FMFG,
      author = {Faber, Tracy and Modersitzki, Jan and Folks, Russell and Garcia, Ernest},
      title = {Detecting Changes in Serial Myocardial Perfusion SPECT: A Simulation Study},
      journal = {Journal of Nuclear Cardiology},
      volume = {12},
      number={3},
      year = {2005},
      publisher={},
      pages = {302-310},
      DOI={10.1016/j.nuclcard.2004.12.299},
    }
  • Haber, E. and Modersitzki, J.: Beyond Mutual Information: A Simple and Robust Alternative pp. 350-354, Springer Berlin/ Heidelberg, 2005
    BibTeX Link Datei
    @conference{2005-BVM-HM,
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Beyond Mutual Information: A Simple and Robust Alternative},
      book={Bildverarbeitung f\"{u}r die Medizin 2005},
      editor = {HP Meinzer and H Handels and A Horsch and T Tolxdorff},
      year = {2005},
      publisher={Springer Berlin/ Heidelberg},
      pages = {350-354},
      DOI={10.1007/b137570},
      ISSN={1431-472X},
      ISBN={978-3-540-25052-4 (Print), 978-3-540-26431-6 (Online)},
    }
  • Haber, E. and Modersitzki, J.: A Scale Space Method for Volume Preserving Image Registration vol. Volume 3459, pp. 561-572, Spriger Berlin /Heidelberg, 2005
    BibTeX Link Datei
    @ARTICLE{2005-SSPMSV-HM, 
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {A Scale Space Method for Volume Preserving  Image Registration  },
      book={Scale Space and PDE Methods in Computer Vision},
      volume = {Volume 3459},
      year = {2005},
      publisher={Spriger Berlin /Heidelberg},
      pages = {561-572},
      DOI={10.1007/b107185},
      ISSN={0302-9743 (Print), 1611-3349 (Online)},
      ISBN={978-3-540-25547-5},
    }

2004

  • Haber, E. and Modersitzki, J.: Volume Preserving Image Registration vol. 3216, pp. 591-598, Springer Berlin/ Heidelberg, LNCS, 2004
    BibTeX Link Datei
    @ARTICLE{2004-MICCAI-HM,
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Volume Preserving Image Registration },
      book= {Medical Image Computing and Computer-Assisted Intervention },
      volume = { 3216},
      year = {2004},
      publisher={Springer Berlin/ Heidelberg, LNCS},
      pages = {591-598},
      DOI={10.1007/b100265},
      ISSN={0302-9743 (Print), 1611-3349 (Online)},
      ISBN={978-3-540-22976-6},
    }
  • Conrad, M., Hubold, C., Fischer, B., Schweiger, U., Fehm, H. L. and Peters, A.: The Selfish Brain: A new Model of the LHPA-System Exp Clin Endocrinol Diabetes, vol. 112, pp. 481-482, 2004
    BibTeX
    @article{2004-ECED-CHFSFA,
    	Author = {Conrad, Matthias and Hubold, Christian and Fischer, Bernd and Schweiger, Ulrich and Fehm, Horst Lorenz and Peters, Achim},
    	Journal = {Exp Clin Endocrinol Diabetes},
    	Pages = {481--482},
    	Title = {The Selfish Brain: A new Model of the {LHPA}-System},
    	Volume = {112},
    	Year = {2004}
    }
  • Wirtz, S., Fischer, B., Modersitzki, J. and Schmitt, O.: Super-fast Elastic Registration of Histologic Images of a Whole Rat Brain for Three-dimensional Reconstruction Proceeding of the SPIE, vol. 5370, pp. 328-334, SPIE, 2004
    BibTeX Link Datei
    @conference{2004-SPIE-WFMS, 
      author = {Wirtz, Stefan and Fischer, Bernd and Modersitzki, Jan and Schmitt, Oliver},
      title = {Super-fast Elastic Registration of Histologic Images of a Whole Rat Brain for Three-dimensional Reconstruction},
      journal = {Proceeding of the SPIE},
      editor = {JM Fitzpatrick and M Sonka},
      volume = { 5370},
      year = {2004},
      publisher={SPIE},
      pages = {328-334},
      DOI={10.1117/12.534110},
    }
  • Fischer, B. and Modersitzki, J.: On medical Image Registration in Proceedings of the 16th International Symposium on Mathematical Theory of Networks and Systems (MTNS 2004), Leuven, Belgium, pp. 1-5, Schattauer Verlag, Stuttgart, 2004
    BibTeX
    @INPROCEEDINGS{2004-MTNS-FM,
      author = {Fischer, Bernd and Modersitzki, Jan},
      title = {On medical Image Registration},
      booktitle = {Proceedings of the 16th International Symposium on Mathematical Theory
        of Networks and Systems (MTNS 2004), Leuven, Belgium},
      year = {2004},
      editor = {B de Moor and B Motmans},
      pages = {1-5},
      publisher = {Schattauer Verlag, Stuttgart},
      ISBN={ 90-5682-517-8},
    }
  • Haber, E. and Modersitzki, J.: Numerical Methods for Volume Preserving Image Registration Inverse Problems, vol. Volume 20, pp. 1621-1638, Institute of Physics Publishing, 2004
    BibTeX Link Datei
    @ARTICLE{2004-IP-HM,
      author = {Haber, Eldad and Modersitzki, Jan},
      title = {Numerical Methods for Volume Preserving Image Registration },
      journal = {Inverse Problems},
      volume = {Volume 20},
      year = {2004},
      publisher={Institute of Physics Publishing},
      pages = {1621-1638},
      DOI={10.1088/0266-5611/20/5/018},
     }
  • Modersitzki, J.: Numerical Methods for Image Registration Oxford University Press, New York, 2004
    BibTeX
    @BOOK{2004-OUP-M,
      title = {Numerical Methods for Image Registration},
      publisher = {Oxford University Press},
      address = {New York},
      year = {2004},
      author = {Modersitzki, Jan},
    }
  • Haber, E., Modersitzki, J. and Heldmann, S.: Multilevel Optimization Methods for Mutual Information Registration no. TR-2004-015-A, Emory University, Atlanta GA 30322, 2004
    BibTeX
    @TECHREPORT{2004-TR-HHM,
      author = {Haber, Eldad and Modersitzki, Jan and Heldmann, Stefan},
      title = {Multilevel Optimization Methods for Mutual Information Registration},
      institution = {Department of Mathematics and Computer Science},
      year = {2004},
      type = {Technical Report},
      number = {TR-2004-015-A},
      address = {Emory University, Atlanta GA 30322},
      note = {Submitted to Inverse Problems},
    }
  • Schmitt, O., Wirtz, S., Modersitzki, J., Fischer, B., Heldmann, S. and Wree, A.: Microregistration and microreconstruction of a whole mouse brain 2004
    BibTeX
    @misc{2004-SWMFHW,
    	Author = {Schmitt, Oliver and Wirtz, Stefan and Modersitzki, Jan and Fischer, Bernd and Heldmann, Stefan and Wree, A.},
    	Howpublished = {Poster, TH 330, NeuroImage 22},
    	Title = {Microregistration and microreconstruction of a whole mouse brain},
    	Year = {2004}}
  • Fischer, B. and Modersitzki, J.: Large Scale Problems Arising from Image Registration GAMM Mitteilungen, vol. 27, no. 2, pp. 104-120, 2004
    BibTeX Datei
    @ARTICLE{2004-GAMM-FM,  
      author = {Fischer, Bernd and Modersitzki, Jan},
      title = {Large Scale Problems Arising from Image Registration},
      journal = {GAMM Mitteilungen},
      volume = {27},
      number={2},
      year = {2004},
      pages = {104-120},
    }
  • Fischer, B. and Modersitzki, J.: Intensity Based Image Registration with a Guaranteed One-to-one Point Match Methods of Information in Medicine, pp. 327-330, Schattauer Verlag, Stuttgart, 2004
    BibTeX Datei
    @ARTICLE{2004-MIM-FM, 
      author = {Fischer, Bernd and Modersitzki, Jan},
      title = {Intensity Based Image Registration with a Guaranteed One-to-one Point Match},
      journal = {Methods of Information in Medicine},
      Xvolume={43},
      Xnumber = {4 },
      year = {2004},
      publisher={Schattauer Verlag, Stuttgart},
      pages = {327-330},
      ISSN={0026-1270},
    }
  • Heldmann, S., Mahnke, O., Potts, D., Modersitzki, J. and Fischer, B.: Fast Computation of Mutual Information in a Variational Image Registration Approach Bildverarbeitung für die Medizin, pp. 448-452, Springer, Informatik aktuell, 2004
    BibTeX Datei
    @conference{2004-BVM-HMPMF,
      author = {Heldmann,Stefan and Mahnke, Oliver and Potts, Daniel and Modersitzki, Jan and Fischer, Bernd },
      title ={ Fast Computation of Mutual Information in a Variational Image Registration Approach },
      journal = {Bildverarbeitung f\"{u}r die Medizin},
      year = {2004},
       pages = {448--452},
      publisher={Springer},
      Series = {Informatik aktuell},
    }
  • Kaus, M. R., Netsch, T., Kabus, S., Pekar, V., McNutt, T. and Fischer, B.: Estimation of Organ Motion from 4D CT for 4D Radiation Therapy Planning of Lung Cancer in Medical Image Computing and Computer-Assisted Intervention- MICCAI 2004, pp. 1017-1024, Springer, LNCS 3217, 2004
    BibTeX
    @inproceedings{2004-MICCAI-KNKPMF,
    	Author = {Kaus, Michael R. and Netsch, Thomas and Kabus, Sven and Pekar, Vladimir and McNutt, Todd and Fischer, Bernd},
    	Booktitle = {Medical Image Computing and Computer-Assisted Intervention- MICCAI 2004},
    	Editor = {C. Barillot and D.R. Haynor and P. Hellier},
    	Pages = {1017--1024},
    	Publisher = {Springer, LNCS 3217},
    	Title = {Estimation of Organ Motion from {4D CT} for {4D} Radiation Therapy Planning of Lung Cancer},
    	Year = {2004}
    }
  • Fischer, B. and Modersitzki, J.: Ein Verfahren zur automatischen Registrierung von Bildern 2004
    BibTeX
    @misc{2004-P-FM,
    	Author = {Fischer, Bernd and Modersitzki, Jan},
    	Howpublished = {DE 102 53 784.4},
    	Title = {Ein {V}erfahren zur automatischen {R}egistrierung von {B}ildern},
    	Year = {2004}
    }
  • Kabus, S., Netsch, T., Fischer, B. and Modersitzki, J.: B-Spline Registration of 3D Images with Levenberg-Marquardt Optimization Proceeding of the SPIE, Medical Imaging, vol. 5370, pp. 304-313, JM Fitzpatrick and M Sonka, 2004
    BibTeX Datei
    @conference{2004-SPIE-KNFM,
      author = {Kabus, Sven and Netsch, Thomas and Fischer, Bernd and Modersitzki, Jan},
      title = {B-Spline Registration of 3D Images with  Levenberg-Marquardt Optimization},
      journal = {Proceeding of the SPIE, Medical Imaging},
      volume = {5370},
      year = {2004},
      publisher={JM Fitzpatrick and M Sonka},
      pages = {304-313},
    }
  • Fischer, B. and Modersitzki, J.: A unified approach to fast image registration and a new curvature based registration technique Linear Algebra and its Applications, vol. 380, pp. 107-124, 2004
    BibTeX
    @ARTICLE{2004-LAA-FM,
      author = {B. Fischer and J. Modersitzki},
      title = {A unified approach to fast image registration and a new curvature
    	based registration technique},
      journal = {Linear Algebra and its Applications},
      year = {2004},
      volume = {380},
      pages = {107--124}
    }

  • Heck, C., Ruthotto, L., Modersitzki, J. and Berkels, B.: Model-based parameter estimation in DCE-MRI without an Arterial Input Function in BVM 2014, Bildverarbeitung für die Medizin 2014, pp. 246-251,
    BibTeX
    @Inproceedings{2014-BVM-HRMB,
    	Author = {Heck, Constantin and Ruthotto, Lars and Modersitzki, Jan and Berkels, Benjamin},
    booktitle = {BVM 2014, Bildverarbeitung f{\"u}r die Medizin 2014},
    	Date-Added = {2014-01-22 13:52:07 +0000},
    	Date-Modified = {2014-01-22 13:54:28 +0000},
    	Title = {Model-based parameter estimation in DCE-MRI without an Arterial Input Function}
    pages = {246--251}}
    
  • Trull, A. K., Berkels, B. and Modersitzki, J.: Glomerular Filtration Rate Estimation from Dynamic Contrast-Enhanced MRI using a Separable Compartment Model and Parameter Elimination in BVM 2014, Bildverarbeitung für die Medizin 2014, pp. 30-35,
    BibTeX
    @inproceedings{2014-BVM-TBM,
    	Author = {Trull, Anna Katharina and Berkels, Benjamin and Modersitzki, Jan },
    Booktitle = {BVM 2014, Bildverarbeitung f{\"u}r die Medizin 2014},
    	Title = {Glomerular Filtration Rate Estimation from Dynamic Contrast-Enhanced MRI using a Separable Compartment Model and Parameter Elimination}
    pages = {30--35}}
  • Peshko, O., Modersitzki, J., Terlaky, T., Menard, C., Craig, T. and Moseley, D.: Automatic localization and tracking of fiducial markers for organ motion analysis in image-guided radiation therapy pp. 1-4, Proceedings of the SPIE 2010, Medical Imaging,
    BibTeX
    @INPROCEEDINGS{2009-SPIE-PMTMCM,
      author = {Peshko, Olesya and Modersitzki , Jan and Terlaky, Terlaky and Menard, C and Craig, T. and Moseley, Douglas},
      title = {Automatic localization and tracking of fiducial markers for organ motion analysis in image-guided radiation therapy},
      publisher = { Proceedings of the SPIE 2010, Medical Imaging}, 
      note = {(Submitted)},
      pages = {1--4}, 
    }