2022
Florian Mannel,
On the convergence of Broyden’s method and some accelerated schemes for singular problems, pp. 1--29, 2022.
On the convergence of Broyden’s method and some accelerated schemes for singular problems, pp. 1--29, 2022.
| DOI: | 10.1093/imanum/drab096 |
| Bibtex: | @Article{Mannel2,
Author={{Mannel, Florian}},
Title={{On the convergence of Broyden’s method and some accelerated schemes for singular problems}},
FJournal={{IMA Journal of Numerical Analysis}},
Volume={},
Number={},
Pages={1--29},
Year={2022},
Language={English},
DOI= 10.1093/imanum/drab096},
eprint={https://academic.oup.com/imajna/advance-article-pdf/doi/10.1093/imanum/drab096/42198372/drab096.pdf},
} |
Florian
Mannel, and
Armin
Rund,
A hybrid semismooth quasi-Newton method for structured nonsmooth operator equations in Banach spaces, JoCA , vol. 29, no. 1, pp. 183--204, 2022.
A hybrid semismooth quasi-Newton method for structured nonsmooth operator equations in Banach spaces, JoCA , vol. 29, no. 1, pp. 183--204, 2022.
| File: | jca29011.htm |
| Bibtex: | @Article{Mannel3,
Author={{Mannel, Florian and Rund, Armin}},
Title={{A hybrid semismooth quasi-Newton method for structured nonsmooth operator equations in Banach spaces}},
FJournal={{Journal of Convex Analysis}},
Journal={{JoCA}},
Volume={29},
Number={1},
Pages={183--204},
Year={2022},
Language={English},
url={https://www.heldermann.de/JCA/JCA29/JCA291/jca29011.htm},
} |
Zaccharie
Ramzi,
Florian
Mannel,
Shaojie
Bai,
Jean-Luc
Starck,
Philippe
Ciuciu, and
Thomas
Moreau,
SHINE: SHaring the INverse Estimate from the forward pass for bi-level optimization and implicit models, 2022.
SHINE: SHaring the INverse Estimate from the forward pass for bi-level optimization and implicit models, 2022.
| File: | forum |
| Bibtex: | @Article{Mannel5,
title={{SHINE}: {SH}aring the {IN}verse Estimate from the forward pass for bi-level optimization and implicit models},
author={Ramzi, Zaccharie and Mannel, Florian and Bai, Shaojie and Starck, Jean-Luc and Ciuciu, Philippe and Moreau, Thomas},
FJournal={The Tenth International Conference on Learning Representations (ICLR)},
year={2022},
Language={English},
url={https://openreview.net/forum?id=-ApAkox5mp}
}
|
Sonja
Jäckle,
Rieke
Alpers,
Lisa
Kühne,
Jakob
Schumacher,
Benjamin
Geisler, and
Max
Westphal,
EsteR -A Digital Toolkit for COVID-19 Decision Support in Local Health Authorities, in German Medical Data Sciences 2022--Future Medicine: More Precise, More Integrative, More Sustainable! , IOS Press, 2022, pp. 17--24.
EsteR -A Digital Toolkit for COVID-19 Decision Support in Local Health Authorities, in German Medical Data Sciences 2022--Future Medicine: More Precise, More Integrative, More Sustainable! , IOS Press, 2022, pp. 17--24.
Danielle
Bednarski, and
Jan
Lellmann,
Inverse Scale Space Iterations for Non-Convex Variational Problems: The Continuous and Discrete Case, J Math Imaging Vis , 2022.
Inverse Scale Space Iterations for Non-Convex Variational Problems: The Continuous and Discrete Case, J Math Imaging Vis , 2022.
| DOI: | 10.1007/s10851-022-01125-8 |
| File: | s10851-022-01125-8 |
| Bibtex: | @Article{bednarski2022inverse,
author = {Danielle Bednarski and Jan Lellmann},
title = {Inverse Scale Space Iterations for Non-Convex Variational Problems: The Continuous and Discrete Case},
journal = {J Math Imaging Vis},
year = {2022},
doi = {10.1007/s10851-022-01125-8},
url = {https://link.springer.com/article/10.1007/s10851-022-01125-8},
} |
Frederic
Kanter, and
Jan
Lellmann,
A Flexible Meta Learning Model for Image Registration, in Proceedings of The 5th International Conference on Medical Imaging with Deep Learning , Konukoglu, Ender and Menze, Bjoern and Venkataraman, Archana and Baumgartner, Christian and Dou, Qi and Albarqouni, Shadi, Eds. PMLR, Jul.2022. pp. 638-652.
A Flexible Meta Learning Model for Image Registration, in Proceedings of The 5th International Conference on Medical Imaging with Deep Learning , Konukoglu, Ender and Menze, Bjoern and Venkataraman, Archana and Baumgartner, Christian and Dou, Qi and Albarqouni, Shadi, Eds. PMLR, Jul.2022. pp. 638-652.
AD Hering,
Deep-Learning-based Image Registration and Tumor Follow-up Analysis, 2022.
Deep-Learning-based Image Registration and Tumor Follow-up Analysis, 2022.
| File: | |
| Bibtex: | @phdthesis{hering2022deep,
title={Deep-Learning-based Image Registration and Tumor Follow-Up Analysis},
author={Hering, AD},
year={2022},
school={[Sl]:[Sn]}
} |
Till
Nicke,
Laura
Graf,
Mikko
Lauri,
Sven
Mischkewitz,
Simone
Frintrop, and
Mattias P
Heinrich,
Realtime optical flow estimation on vein and artery ultrasound sequences based on knowledge-distillation, in International Workshop on Biomedical Image Registration , Jul.2022. pp. 134—143.
Realtime optical flow estimation on vein and artery ultrasound sequences based on knowledge-distillation, in International Workshop on Biomedical Image Registration , Jul.2022. pp. 134—143.
| DOI: | 10.1007/978-3-031-11203-4_15 |
| Bibtex: | @inproceedings{nicke2022realtime,
title={Realtime optical flow estimation on vein and artery ultrasound sequences based on knowledge-distillation},
author={Nicke, Till and Graf, Laura and Lauri, Mikko and Mischkewitz, Sven and Frintrop, Simone and Heinrich, Mattias P},
booktitle={International Workshop on Biomedical Image Registration},
pages={134--143},
year={2022},
organization={Springer}
} |
Alessa
Hering,
Lasse
Hansen,
Tony CW
Mok,
Albert CS
Chung,
Hanna
Siebert,
Stephanie
Häger,
Annkristin
Lange,
Sven
Kuckertz,
Stefan
Heldmann,
Wei
Shao, and
Tanja
Loßau,
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning, IEEE Transactions on Medical Imaging , vol. 42, no. 3, pp. 697—712, 2022. IEEE.
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning, IEEE Transactions on Medical Imaging , vol. 42, no. 3, pp. 697—712, 2022. IEEE.
Marcus
Barann,
Stefan
Heldmann,
Jan
Klein, and
Stefan
Krass,
A Python SDK for Authoring and using Computer-interpretable Guidelines., in BIOINFORMATICS , 2022. pp. 99—106.
A Python SDK for Authoring and using Computer-interpretable Guidelines., in BIOINFORMATICS , 2022. pp. 99—106.
Andreas
Fuchs,
Joachim
Georgii,
Elham
Taghizadeh,
Stefan
Heldmann,
Thomas
Lange,
Sebastian F
Bendak,
Markus
Siegel,
Tayfun
Yilmaz,
Hagen
Schmal, and
Kaywan
Izadpanah,
In-vivo assessment of meniscal movement in the knee joint during internal and external rotation under load, Journal of experimental orthopaedics , vol. 9, no. 1, pp. 102, 2022. Springer.
In-vivo assessment of meniscal movement in the knee joint during internal and external rotation under load, Journal of experimental orthopaedics , vol. 9, no. 1, pp. 102, 2022. Springer.
Sven
Kuckertz,
Jan
Klein,
Christiane
Engel,
Benjamin
Geisler,
Stefan
Krass, and
Stefan
Heldmann,
Fully automated longitudinal tracking and in-depth analysis of the entire tumor burden: unlocking the complexity, in Medical Imaging 2022: Computer-Aided Diagnosis , 2022. pp. 469—473.
Fully automated longitudinal tracking and in-depth analysis of the entire tumor burden: unlocking the complexity, in Medical Imaging 2022: Computer-Aided Diagnosis , 2022. pp. 469—473.
Claudia E
Weber,
Julia
Krämer,
Matthias
Wittayer,
Johannes
Gregori,
Sigurd
Randoll,
Florian
Weiler,
Stefan
Heldmann,
Christina
Roßmanith,
Michael
Platten,
Achim
Gass, and
Tanja
Loßau,
Association of iron rim lesions with brain and cervical cord volume in relapsing multiple sclerosis, European radiology , vol. 32, no. 3, pp. 2012—2022, 2022. Springer.
Association of iron rim lesions with brain and cervical cord volume in relapsing multiple sclerosis, European radiology , vol. 32, no. 3, pp. 2012—2022, 2022. Springer.
Malte Maria
Sieren,
Cornelia
Widmann,
Nick
Weiss,
Jan Hendrik
Moltz,
Florian
Link,
Franz
Wegner,
Erik
Stahlberg,
Marco
Horn,
Thekla Helene
Oecherting,
Jan Peter
Goltz, and
Harry
Haynes,
Automated segmentation and quantification of the healthy and diseased aorta in CT angiographies using a dedicated deep learning approach, European radiology , vol. 32, no. 1, pp. 690—701, 2022. Springer.
Automated segmentation and quantification of the healthy and diseased aorta in CT angiographies using a dedicated deep learning approach, European radiology , vol. 32, no. 1, pp. 690—701, 2022. Springer.
Daniel
Romberg,
Klaus
Strohmenger,
Christoph
Jansen,
Tobias
Küster,
Nick
Weiss,
Christian
Geißler,
Tomasz
Sołtysiński,
Michael
Takla,
Peter
Hufnagl,
Norman
Zerbe, and
Harry
Haynes,
EMPAIA app interface: an open and vendor-neutral interface for AI applications in pathology, Computer methods and programs in biomedicine , vol. 215, pp. 106596, 2022. Elsevier.
EMPAIA app interface: an open and vendor-neutral interface for AI applications in pathology, Computer methods and programs in biomedicine , vol. 215, pp. 106596, 2022. Elsevier.
2021
Bhakti
Baheti,
Satrajit
Chakrabarty,
Hamed
Akbari,
Michel
Bilello,
Benedikt
Wiestler,
Julian
Schwarting,
Evan
Calabrese,
Jeffrey
Rudie,
Syed
Abidi,
Mina
Mousa,
Javier
Villanueva-Meyer,
Brandon K.K.
Fields,
Florian
Kofler,
Russell Takeshi
Shinohara,
Juan Egenio
Iglesias,
Tony C W
Mok,
Albert C S
Chung,
Marek
Wodzinski,
Artur
Jurgas,
Niccolò
Marini,
Manfredo
Atzori,
Henning
Müller,
Christoph
Großbröhmer,
Hanna
Siebert,
Lasse
Hansen,
Mattias P
Heinrich,
Luca
Canalini,
Jan
Klein,
Annika
Gerken,
Stefan
Heldmann,
Alessa
Hering, and
others,
The brain tumor sequence registration (brats-reg) challenge: Establishing correspondence between pre-operative and follow-up mri scans of diffuse glioma patients, arXiv preprint arXiv:2112.06979 , 2021.
The brain tumor sequence registration (brats-reg) challenge: Establishing correspondence between pre-operative and follow-up mri scans of diffuse glioma patients, arXiv preprint arXiv:2112.06979 , 2021.
Sven
Kuckertz,
Florian
Weiler,
Britta
Matusche,
Carsten
Lukas,
Lothar
Spies,
Jan
Klein, and
Stefan
Heldmann,
A system for fully automated monitoring of lesion evolution over time in multiple sclerosis, in Medical Imaging 2021: Computer-Aided Diagnosis , 2021. pp. 553—558.
A system for fully automated monitoring of lesion evolution over time in multiple sclerosis, in Medical Imaging 2021: Computer-Aided Diagnosis , 2021. pp. 553—558.
Danielle
Bednarski, and
Jan
Lellmann,
Inverse scale space iterations for non-convex variational problems using functional lifting, in International Conference on Scale Space and Variational Methods in Computer Vision , 2021. pp. 229—241.
Inverse scale space iterations for non-convex variational problems using functional lifting, in International Conference on Scale Space and Variational Methods in Computer Vision , 2021. pp. 229—241.
| DOI: | 10.1007/978-3-030-75549-2_19 |
| Bibtex: | @inproceedings{bednarski2021inverse,
title={Inverse scale space iterations for non-convex variational problems using functional lifting},
author={Bednarski, Danielle and Lellmann, Jan},
booktitle={International Conference on Scale Space and Variational Methods in Computer Vision},
pages={229--241},
year={2021},
organization={Springer}
}
|
Jan
Lellmann, and
Jan
Modersitzki,
Guest Editorial: Scale Space and Variational Methods, Journal of Mathematical Imaging and Vision , vol. 63, no. 2, pp. 131—132, 2021. Springer.
Guest Editorial: Scale Space and Variational Methods, Journal of Mathematical Imaging and Vision , vol. 63, no. 2, pp. 131—132, 2021. Springer.
| DOI: | 10.1007/s10851-020-01012-0 |
| Bibtex: | @article{lellmann2021guest,
title={Guest Editorial: Scale Space and Variational Methods},
author={Lellmann, Jan and Modersitzki, Jan},
journal={Journal of Mathematical Imaging and Vision},
volume={63},
number={2},
pages={131--132},
year={2021},
publisher={Springer}
}
|
Kai Brehmer,
SqN: A Novel Distance Measure for Multiple Images and Applications, Institute of Mathematics and Image Computing, University of Lübeck, 2021.
SqN: A Novel Distance Measure for Multiple Images and Applications, Institute of Mathematics and Image Computing, University of Lübeck, 2021.
| File: | |
| Bibtex: | @phdthesis{2021-PhD-Brehmer,
Author = {{Kai Brehmer}},
Title = {SqN: A Novel Distance Measure for Multiple Images and Applications},
School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
Year = {2021},
} |
Sonja
Jäckle,
Veronica
Garcia-Vazquez,
Tim
Eixmann,
Florian
Matysiak,
Felix
Haxthausen,
Malte
Sieren,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Floris
Ernst,
Markus
Kleemann, and
Torben
Pätz,
Abstract: 3D Guidance Including Shape Sensing of a Stentgraft System, in Bildverarbeitung für die Medizin 2021 , Springer, 2021, pp. 34--34.
Abstract: 3D Guidance Including Shape Sensing of a Stentgraft System, in Bildverarbeitung für die Medizin 2021 , Springer, 2021, pp. 34--34.
| DOI: | 10.1007/978-3-658-33198-6_9 |
| File: | 10.1007%2F978-3-658-33198-6_9 |
| Bibtex: | @incollection{jaeckle20213BVM_3DCatheter,
title={Abstract: 3D Guidance Including Shape Sensing of a Stentgraft System},
author={J{\"a}ckle, Sonja and Garc\'ia-V{\'a}zquez, Ver{\'o}nica and Eixmann, Tim and Matysiak, Florian and von Haxthausen, Felix and Sieren, Malte and Schulz-Hildebrandt, Hinnerk and H{\"u}ttmann, Gereon and Ernst, Floris and Kleemann, Markus and P{\"a}tz, Torben},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2021},
pages={34--34},
year={2021},
doi={10.1007/978-3-658-33198-6_9},
url={https://link.springer.com/chapter/10.1007%2F978-3-658-33198-6_9},
keywords={NavEVAR},
publisher={Springer}
} |
Sonja
Jäckle,
Elias
Röger,
Volker
Dicken,
Benjamin
Geisler,
Jakob
Schumacher, and
Max
Westphal,
A Statistical Model to Assess Risk for Supporting COVID-19 Quarantine Decisions, International Journal of Environmental Research and Public Health , vol. 18, no. 17, 2021.
A Statistical Model to Assess Risk for Supporting COVID-19 Quarantine Decisions, International Journal of Environmental Research and Public Health , vol. 18, no. 17, 2021.
| DOI: | 10.3390/ijerph18179166 |
| File: | 9166 |
| Bibtex: | @Article{jaeckle2021IJERPH,
AUTHOR = {Jäckle, Sonja and Röger, Elias and Dicken, Volker and Geisler, Benjamin and Schumacher, Jakob and Westphal, Max},
TITLE = {A Statistical Model to Assess Risk for Supporting COVID-19 Quarantine Decisions},
JOURNAL = {International Journal of Environmental Research and Public Health},
VOLUME = {18},
YEAR = {2021},
NUMBER = {17},
ARTICLE-NUMBER = {9166},
URL = {https://www.mdpi.com/1660-4601/18/17/9166},
ISSN = {1660-4601},
ABSTRACT = {In Germany, local health departments are responsible for surveillance of the current pandemic situation. One of their major tasks is to monitor infected persons. For instance, the direct contacts of infectious persons at group meetings have to be traced and potentially quarantined. Such quarantine requirements may be revoked, when all contact persons obtain a negative polymerase chain reaction (PCR) test result. However, contact tracing and testing is time-consuming, costly and not always feasible. In this work, we present a statistical model for the probability that no transmission of COVID-19 occurred given an arbitrary number of negative test results among contact persons. Hereby, the time-dependent sensitivity and specificity of the PCR test are taken into account. We employ a parametric Bayesian model which combines an adaptable Beta-Binomial prior and two likelihood components in a novel fashion. This is illustrated for group events in German school classes. The first evaluation on a real-world dataset showed that our approach can support important quarantine decisions with the goal to achieve a better balance between necessary containment of the pandemic and preservation of social and economic life. Future work will focus on further refinement and evaluation of quarantine decisions based on our statistical model.},
DOI = {10.3390/ijerph18179166}
}
|
Sonja
Jäckle,
Tim
Eixmann,
Florian
Matysiak,
Malte Maria
Sieren,
Marco
Horn,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann, and
Torben
Pätz,
3D Stent Graft Guidance based on Tracking Systems for Endovascular Aneurysm Repair, Current Directions in Biomedical Engineering , vol. 7, no. 1, pp. 17--20, 2021.
3D Stent Graft Guidance based on Tracking Systems for Endovascular Aneurysm Repair, Current Directions in Biomedical Engineering , vol. 7, no. 1, pp. 17--20, 2021.
| DOI: | doi:10.1515/cdbme-2021-1004 |
| File: | cdbme-2021-1004 |
| Bibtex: | @article{jaeckle2021CURAC,
author = {Sonja Jäckle and Tim Eixmann and Florian Matysiak and Malte Maria Sieren and Marco Horn and Hinnerk Schulz-Hildebrandt and Gereon Hüttmann and Torben Pätz},
doi = {doi:10.1515/cdbme-2021-1004},
url = {https://doi.org/10.1515/cdbme-2021-1004},
title = {3D Stent Graft Guidance based on Tracking Systems for Endovascular Aneurysm Repair},
journal = {Current Directions in Biomedical Engineering},
number = {1},
volume = {7},
year = {2021},
keywords={NavEVAR},
pages = {17--20}
}
|
Sonja
Jäckle,
Annkristin
Lange,
Verónica
García-Vázquez,
Tim
Eixmann,
Florian
Matysiak,
Malte Maria
Sieren,
Marco
Horn,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Floris
Ernst,
Stefan
Heldmann,
Torben
Pätz, and
Tobias
Preusser,
Instrument localisation for endovascular aneurysm repair: Comparison of two methods based on tracking systems or using imaging, The International Journal of Medical Robotics and Computer Assisted Surgery , vol. 17, no. 6, pp. e2327, 2021.
Instrument localisation for endovascular aneurysm repair: Comparison of two methods based on tracking systems or using imaging, The International Journal of Medical Robotics and Computer Assisted Surgery , vol. 17, no. 6, pp. e2327, 2021.
Johannes
Lotz,
Nick
Weiss,
Jeroen
Laak, and
Stefan
Heldmann,
High-resolution image registration of consecutive and re-stained sections in histopathology, arXiv preprint arXiv:2106.13150 , 2021.
High-resolution image registration of consecutive and re-stained sections in histopathology, arXiv preprint arXiv:2106.13150 , 2021.
| DOI: | 10.48550/arXiv.2106.13150 |
| Bibtex: | @article{lotz2021high,
title={High-resolution image registration of consecutive and re-stained sections in histopathology},
author={Lotz, Johannes and Weiss, Nick and van der Laak, Jeroen and Heldmann, Stefan},
journal={arXiv preprint arXiv:2106.13150},
year={2021}
}
|
Journal of Mathematical Imaging and Vision, Special Issue on Scale Space and Variational Methods in Computer Vision,
W.
Diepeveen, and
J.
Lellmann,
An Inexact Semismooth Newton Method on Riemannian Manifolds with Application to Duality-Based Total Variation Denoising, SIAM Journal on Imaging Sciences , vol. 14, no. 4, pp. 1565--1600, 2021.
An Inexact Semismooth Newton Method on Riemannian Manifolds with Application to Duality-Based Total Variation Denoising, SIAM Journal on Imaging Sciences , vol. 14, no. 4, pp. 1565--1600, 2021.
André
Homeyer,
Johannes
Lotz,
Lars Ole
Schwen,
Nick
Weiss,
Daniel
Romberg,
Henning
Höfener,
Norman
Zerbe, and
Peter
Hufnagl,
Artificial Intelligence in Pathology: From Prototype to Product, Journal of Pathology Informatics , vol. 12, no. 1, pp. 13, 2021. Elsevier BV.
Artificial Intelligence in Pathology: From Prototype to Product, Journal of Pathology Informatics , vol. 12, no. 1, pp. 13, 2021. Elsevier BV.
| DOI: | https://doi.org/10.4103/jpi.jpi_84_20 |
| File: | S2153353922001353 |
| Bibtex: | @article{Homeyer2021,
doi={10.4103/jpi.jpi_84_20},
url={https://doi.org/10.4103%2Fjpi.jpi_84_20},
year={2021},
publisher={Elsevier {BV}},
volume={12},
number={1},
pages={13},
author={Homeyer, André and Lotz, Johannes and Schwen, Lars Ole and Weiss, Nick and Romberg, Daniel and Höfener, Henning and Zerbe, Norman and Hufnagl, Peter},
title={Artificial intelligence in pathology: From prototype to product},
journal={Journal of Pathology Informatics}
}
|
Alessa
Hering,
Lasse
Hansen,
Tony CW
Mok,
Albert
Chung,
Hanna
Siebert,
Stephanie
Häger,
Annkristin
Lange,
Sven
Kuckertz,
Stefan
Heldmann,
Wei
Shao, and
Tanja
Loßau,
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning, arXiv preprint arXiv:2112.04489 , 2021.
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning, arXiv preprint arXiv:2112.04489 , 2021.
Alessa
Hering,
Annkristin
Lange,
Stefan
Heldmann,
Stephanie
Häger, and
Sven
Kuckertz,
Fraunhofer MEVIS Image Registration Solutions for the Learn2Reg 2021 Challenge, in International Conference on Medical Image Computing and Computer-Assisted Intervention , 2021. pp. 147--152.
Fraunhofer MEVIS Image Registration Solutions for the Learn2Reg 2021 Challenge, in International Conference on Medical Image Computing and Computer-Assisted Intervention , 2021. pp. 147--152.
Alessa
Hering,
Felix
Peisen,
Teresa
Amaral,
Sergios
Gatidis,
Thomas
Eigentler,
Ahmed
Othman, and
Jan Hendrik
Moltz,
Whole-Body Soft-Tissue Lesion Tracking and Segmentation in Longitudinal CT Imaging Studies, in Medical Imaging with Deep Learning , 2021. pp. 312--326.
Whole-Body Soft-Tissue Lesion Tracking and Segmentation in Longitudinal CT Imaging Studies, in Medical Imaging with Deep Learning , 2021. pp. 312--326.
Alessa
Hering,
Stephanie
Häger,
Jan
Moltz,
Nikolas
Lessmann,
Stefan
Heldmann, and
Bram
Ginneken,
CNN-based lung CT registration with multiple anatomical constraints, Medical Image Analysis , vol. 72, pp. 102139, 2021. Elsevier.
CNN-based lung CT registration with multiple anatomical constraints, Medical Image Analysis , vol. 72, pp. 102139, 2021. Elsevier.
Holger R
Roth,
Ziyue
Xu,
Carlos Tor
Diez,
Ramon Sanchez
Jacob,
Jonathan
Zember,
Jose
Molto,
Wenqi
Li,
Sheng
Xu,
Baris
Turkbey,
Evrim
Turkbey, and
Tanja
Loßau,
Rapid artificial intelligence solutions in a pandemic-the COVID-19-20 lung CT lesion segmentation challenge, Research Square , 2021. American Journal Experts.
Rapid artificial intelligence solutions in a pandemic-the COVID-19-20 lung CT lesion segmentation challenge, Research Square , 2021. American Journal Experts.
Florian Mannel,
On the order of convergence of Broyden’s method, Calcolo , vol. 58, no. 4, pp. 1--21, 2021.
On the order of convergence of Broyden’s method, Calcolo , vol. 58, no. 4, pp. 1--21, 2021.
| DOI: | 10.1007/s10092-021-00441-6 |
| Bibtex: | @Article{Mannel4,
Author={{Mannel, Florian}},
Title={{On the order of convergence of Broyden’s method}},
FJournal={{Calcolo}},
Journal={{Calcolo}},
Volume={58},
Number={4},
Pages={1--21},
Year={2021},
Language={English},
doi={10.1007/s10092-021-00441-6},
}
|
Maschenka CA.
Balkenhol,
Francesco
Ciompi,
Żaneta
Świderska-Chadaj,
Rob
van Loo,
Milad
Intezar,
Irene
Otte-Höller,
Daan
Geijs,
Johannes
Lotz,
Nick
Weiss,
Thomas
de Bel,
Geert
Litjens,
Peter
Bult, and
Jeroen AWM
van der Laak,
Optimized tumour infiltrating lymphocyte assessment for triple negative breast cancer prognostics, The Breast , vol. 56, pp. 78-87, 2021.
Optimized tumour infiltrating lymphocyte assessment for triple negative breast cancer prognostics, The Breast , vol. 56, pp. 78-87, 2021.
| DOI: | https://doi.org/10.1016/j.breast.2021.02.007 |
| File: | S0960977621000217 |
Harald
Krenzlin,
Dominik
Wesp,
Jan
Schmitt,
Christina
Frenz,
Elena
Kurz,
Julia
Masomi-Bornwasser,
Johannes
Lotz,
Florian
Ringel,
Thomas
Kerz, and
Naureen
Keric,
Decreased superoxide dismutase concentrations (SOD) in plasma and CSF and increased circulating total antioxidant capacity (TAC) are associated with unfavorable neurological outcome after aneurysmal subarachnoid hemorrhage, Journal of Clinical Medicine , vol. 10, no. 6, pp. 1188, 2021. MDPI.
Decreased superoxide dismutase concentrations (SOD) in plasma and CSF and increased circulating total antioxidant capacity (TAC) are associated with unfavorable neurological outcome after aneurysmal subarachnoid hemorrhage, Journal of Clinical Medicine , vol. 10, no. 6, pp. 1188, 2021. MDPI.
Julia
Masomi-Bornwasser,
Elena
Kurz,
Christina
Frenz,
Jan
Schmitt,
Dominik MA
Wesp,
Jochem
König,
Johannes
Lotz,
Florian
Ringel,
Thomas
Kerz,
Harald
Krenzlin, and
P
Hunold,
The influence of oxidative stress on neurological outcomes in spontaneous intracerebral hemorrhage, Biomolecules , vol. 11, no. 11, pp. 1615, 2021. MDPI.
The influence of oxidative stress on neurological outcomes in spontaneous intracerebral hemorrhage, Biomolecules , vol. 11, no. 11, pp. 1615, 2021. MDPI.
Andra-Iza
Iuga,
Tanja
Loßau,
Liliana Laurenco
Caldeira,
Miriam
Rinneburger,
Simon
Lennartz,
Nils Große
Hokamp,
Michael
Püsken,
Heike
Carolus,
David
Maintz,
Tobias
Klinder, and
Harry
Haynes,
Automated mapping and N-Staging of thoracic lymph nodes in contrast-enhanced CT scans of the chest using a fully convolutional neural network, European Journal of Radiology , vol. 139, pp. 109718, 2021. Elsevier.
Automated mapping and N-Staging of thoracic lymph nodes in contrast-enhanced CT scans of the chest using a fully convolutional neural network, European Journal of Radiology , vol. 139, pp. 109718, 2021. Elsevier.
2020
Alessa
Hering,
Stephanie
Häger,
Jan
Moltz,
Nikolas
Lessmann,
Stefan
Heldmann, and
Bram
Ginneken,
Constraining volume change in learned image registration for lung CTs, arXiv preprint arXiv:2011.14372 , pp. 3, 2020.
Constraining volume change in learned image registration for lung CTs, arXiv preprint arXiv:2011.14372 , pp. 3, 2020.
Alessa
Hering, and
Stefan
Heldmann,
mlVIRNET: Improved Deep Learning Registration Using a Coarse to Fine Approach to Capture all Levels of Motion, in Bildverarbeitung für die Medizin 2020: Algorithmen—Systeme—Anwendungen. Proceedings des Workshops vom 15. bis 17. März 2020 in Berlin , 2020. pp. 175—175.
mlVIRNET: Improved Deep Learning Registration Using a Coarse to Fine Approach to Capture all Levels of Motion, in Bildverarbeitung für die Medizin 2020: Algorithmen—Systeme—Anwendungen. Proceedings des Workshops vom 15. bis 17. März 2020 in Berlin , 2020. pp. 175—175.
V.
Corona,
J.
Lellmann,
P.
Nestor,
C.-B.
Schönlieb, and
J.
Acosta-Cabronero,
A multi-contrast MRI approach to thalamus segmentation, Human Brain Mapping , 2020.
A multi-contrast MRI approach to thalamus segmentation, Human Brain Mapping , 2020.
Thomas
Polzin,
Marc
Niethammer,
François-Xavier
Vialard, and
Jan
Modersitzki,
A discretize–optimize approach for LDDMM registration, in Riemannian Geometric Statistics in Medical Image Analysis , Xavier Pennec and Stefan Sommer and Tom Fletcher, Eds. Academic Press, 2020, pp. 479 - 532.
A discretize–optimize approach for LDDMM registration, in Riemannian Geometric Statistics in Medical Image Analysis , Xavier Pennec and Stefan Sommer and Tom Fletcher, Eds. Academic Press, 2020, pp. 479 - 532.
| DOI: | https://doi.org/10.1016/B978-0-12-814725-2.00022-4 |
| ISBN: | 978-0-12-814725-2 |
| File: | B9780128147252000224 |
| Bibtex: | @incollection{PolzinEtAl2020DiscretizeOptimize,
title = "A discretize–optimize approach for LDDMM registration",
editor = "Xavier Pennec and Stefan Sommer and Tom Fletcher",
booktitle = "Riemannian Geometric Statistics in Medical Image Analysis",
publisher = "Academic Press",
pages = "479 - 532",
year = "2020",
isbn = "978-0-12-814725-2",
doi = "https://doi.org/10.1016/B978-0-12-814725-2.00022-4",
url = "http://www.sciencedirect.com/science/article/pii/B9780128147252000224",
author = "Thomas Polzin and Marc Niethammer and François-Xavier Vialard and Jan Modersitzki",
keywords = "LDDMM, Discretize–Optimize, Image Registration, Optimal Control, Lung, Computed Tomography, Runge–Kutta Methods",
abstract = " Large deformation diffeomorphic metric mapping (LDDMM) is a popular approach for deformable image registration with nice mathematical properties. LDDMM encodes spatial deformations through time-varying velocity fields. Hence registration requires optimization over these time-varying velocity fields, resulting in a large-scale constrained optimization problem. Typical numerical solution approaches for LDDMM use an optimize–discretize strategy, where optimality conditions are derived in the continuum and subsequently discretized and solved. Here we explore solution methods based on the discretize–optimize approach and discuss ramifications for popular LDDMM relaxation and shooting approaches. The focus is on a consistent method that uses the appropriate Runge–Kutta methods for the solution of all arising PDEs in the Eulerian frame. Additionally, we discuss both run-time and memory consumption requirements and present an approach that makes the registration suitable for standard PCs. We demonstrate the practicality of our proposed approach in the context of image registration applied to 3D computed tomography (CT) scans of the lung."
} |
Thomas Vogt,
Measure-Valued Variational Models with Applications in Image Processing, Institute of Mathematics and Image Computing, University of L\"ubeck, 2020.
Measure-Valued Variational Models with Applications in Image Processing, Institute of Mathematics and Image Computing, University of L\"ubeck, 2020.
| File: | |
| Bibtex: | @phdthesis{2020-PhD-Vogt,
Author = {Thomas Vogt},
Title = {Measure-Valued Variational Models with Applications in Image Processing},
School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
Year = {2020},
} |
Sonja
Jäckle,
Verónica
García-Vázquez,
Felix
Haxthausen,
Tim
Eixmann,
Malte Maria
Sieren,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Floris
Ernst,
Markus
Kleemann, and
Torben
Paetz,
3D catheter guidance including shape sensing for endovascular navigation, in Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling , Baowei Fei and Cristian A. Linte, Eds. SPIE, 2020. pp. 21 -- 29.
3D catheter guidance including shape sensing for endovascular navigation, in Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling , Baowei Fei and Cristian A. Linte, Eds. SPIE, 2020. pp. 21 -- 29.
| DOI: | 10.1117/12.2548094 |
| File: | 12.2548094 |
| Bibtex: | @inproceedings{jaeckle2020SPIE,
author = {Jäckle, Sonja and García-Vázquez, Verónica and von Haxthausen, Felix and Eixmann, Tim and Sieren, Malte Maria and Schulz-Hildebrandt, Hinnerk and Hüttmann, Gereon and Ernst, Floris and Kleemann, Markus and Paetz, Torben },
title = {{3D catheter guidance including shape sensing for endovascular navigation}},
volume = {11315},
booktitle = {Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling},
editor = {Baowei Fei and Cristian A. Linte},
organization = {International Society for Optics and Photonics},
publisher = {SPIE},
pages = {21 -- 29},
keywords = {catheter guidance, electromagnetic tracking, fiber Bragg gratings, shape sensing, endovascular navigation, endovascular aneurysm repair, NavEVAR},
year = {2020},
doi = {10.1117/12.2548094},
URL = {https://doi.org/10.1117/12.2548094}
} |
Sonja
Jäckle,
Tim
Eixmann,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann, and
Torben
Pätz,
Abstract: Fiber Optical Shape Sensing of Flexible Instruments, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 314--314.
Abstract: Fiber Optical Shape Sensing of Flexible Instruments, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 314--314.
| DOI: | 10.1007/978-3-658-29267-6_70 |
| File: | 978-3-658-29267-6_70 |
| Bibtex: | @incollection{jaeckle2020BVM_FOSS,
title={Abstract: Fiber Optical Shape Sensing of Flexible Instruments},
author={J{\"a}ckle, Sonja and Eixmann, Tim and Schulz-Hildebrandt, Hinnerk and H{\"u}ttmann, Gereon and P{\"a}tz, Torben},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2020},
pages={314--314},
year={2020},
keywords={NavEVAR},
url={https://link.springer.com/chapter/10.1007/978-3-658-29267-6_70},
doi={10.1007/978-3-658-29267-6_70},
publisher={Springer}
} |
Sonja
Jäckle,
Veronica
Garcia-Vazquez,
Felix
Haxthausen,
Tim
Eixmann,
Malte Maria
Sieren,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Floris
Ernst,
Markus
Kleemann, and
Torben
Pätz,
Abstract: 3D Catheter Guidance Including Shape Sensing for Endovascular Navigation, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 261--261.
Abstract: 3D Catheter Guidance Including Shape Sensing for Endovascular Navigation, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 261--261.
| DOI: | 10.1007/978-3-658-29267-6_58 |
| File: | 978-3-658-29267-6_58 |
| Bibtex: | @incollection{jaeckle20203BVM_3DCatheter,
title={Abstract: 3D Catheter Guidance Including Shape Sensing for Endovascular Navigation},
author={J{\"a}ckle, Sonja and Garc\'ia-V{\'a}zquez, Ver{\'o}nica and von Haxthausen, Felix and Eixmann, Tim and Sieren, Malte Maria and Schulz-Hildebrandt, Hinnerk and H{\"u}ttmann, Gereon and Ernst, Floris and Kleemann, Markus and P{\"a}tz, Torben},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2020},
pages={261--261},
year={2020},
doi={10.1007/978-3-658-29267-6_58},
url={https://link.springer.com/chapter/10.1007/978-3-658-29267-6_58},
keywords={NavEVAR},
publisher={Springer}
} |
Annkristin
Lange, and
Stefan
Heldmann,
Intensity-Based 2D-3D Registration Using Normalized Gradient Fields, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 163--168.
Intensity-Based 2D-3D Registration Using Normalized Gradient Fields, in Bildverarbeitung für die Medizin 2020 , Springer, 2020, pp. 163--168.
| File: | 978-3-658-29267-6_33 |
| Bibtex: | @incollection{lange2020intensity,
title={Intensity-Based 2D-3D Registration Using Normalized Gradient Fields},
author={Lange, Annkristin and Heldmann, Stefan},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2020},
pages={163--168},
year={2020},
keywords={NavEVAR},
url={https://doi.org/10.1007/978-3-658-29267-6_33},
publisher={Springer}
} |
Sonja
Jäckle,
Verónica
García-Vázquez,
Tim
Eixmann,
Florian
Matysiak,
Haxthausen,
Malte Maria
Sieren,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Floris
Ernst,
Markus
Kleemann, and
Torben
Paetz,
Three-dimensional guidance including shape sensing of a stentgraft system for endovascular aneurysm repair, International Journal of Computer Assisted Radiology and Surgery , 2020.
Three-dimensional guidance including shape sensing of a stentgraft system for endovascular aneurysm repair, International Journal of Computer Assisted Radiology and Surgery , 2020.
| File: | s11548-020-02167-2 |
| Bibtex: | @article{jaeckle2020IJCARS,
author = {Jäckle, Sonja and García-Vázquez, Verónica and Eixmann, Tim and Matysiak, Florian and von Haxthausen, Felix, and Sieren, Malte Maria and Schulz-Hildebrandt, Hinnerk and Hüttmann, Gereon and Ernst, Floris and Kleemann, Markus and Paetz, Torben },
title = {{Three-dimensional guidance including shape sensing of a stentgraft system for endovascular aneurysm repair}},
journal={International Journal of Computer Assisted Radiology and Surgery},
year={2020},
keywords = {NavEVAR},
url={https://doi.org/10.1007/s11548-020-02167-2},
} |
Johannes Lotz,
Combined Local and Global Image Registration and its Application to Large-Scale Images in Digital Pathology, Institute of Mathematics and Image Computing, University of Lübeck, 2020.
Combined Local and Global Image Registration and its Application to Large-Scale Images in Digital Pathology, Institute of Mathematics and Image Computing, University of Lübeck, 2020.
| File: | |
| Bibtex: | @phdthesis{2020-PhD-Lotz,
Author = {Johannes Lotz},
Title = {Combined Local and Global Image Registration and its Application to Large-Scale Images in Digital Pathology},
School = {Institute of Mathematics and Image Computing, University of Lübeck},
Year = {2020},
} |
Sven
Kuckertz,
Nils
Papenberg,
Jonas
Honegger,
Tomasz
Morgas,
Benjamin
Haas, and
Stefan
Heldmann,
Deep learning based CT-CBCT image registration for adaptive radio therapy, in Medical Imaging 2020: Image Processing , 2020. pp. 113130Q.
Deep learning based CT-CBCT image registration for adaptive radio therapy, in Medical Imaging 2020: Image Processing , 2020. pp. 113130Q.
| File: | 10.1117%2F12.2549531 |
| Bibtex: | @inproceedings{kuckertz2020SPIE,
title={Deep learning based CT-CBCT image registration for adaptive radio therapy},
author={Kuckertz, Sven and Papenberg, Nils and Honegger, Jonas and Morgas, Tomasz and Haas, Benjamin and Heldmann, Stefan},
booktitle={Medical Imaging 2020: Image Processing},
volume={11313},
pages={113130Q},
year={2020},
organization={International Society for Optics and Photonics},
url={http://dx.doi.org/10.1117%2F12.2549531}
} |
Annkristin
Lange, and
Stefan
Heldmann,
Multilevel 2D-3D Intensity-Based Image Registration, in International Workshop on Biomedical Image Registration , 2020. pp. 57--66.
Multilevel 2D-3D Intensity-Based Image Registration, in International Workshop on Biomedical Image Registration , 2020. pp. 57--66.
| File: | 978-3-030-50120-4_6 |
| Bibtex: | @inproceedings{lange2020multilevel,
title={Multilevel 2D-3D Intensity-Based Image Registration},
author={Lange, Annkristin and Heldmann, Stefan},
booktitle={International Workshop on Biomedical Image Registration},
pages={57--66},
year={2020},
organization={Springer},
keywords={NavEVAR},
url={https://doi.org/10.1007/978-3-030-50120-4_6}
} |
Sven
Kuckertz,
Nils
Papenberg,
Jonas
Honegger,
Tomasz
Morgas,
Benjamin
Haas, and
Stefan
Heldmann,
Abstract: Deep Learning Based CT-CBCT Image Registration for Adaptive Radio Therapy, in Bildverarbeitung für die Medizin 2020 , Tolxdorff, Thomas and Deserno, Thomas M. and Handels, Heinz and Maier, Andreas and Maier-Hein, Klaus H. and Palm, Christoph, Eds. Springer, 2020. pp. 229--229.
Abstract: Deep Learning Based CT-CBCT Image Registration for Adaptive Radio Therapy, in Bildverarbeitung für die Medizin 2020 , Tolxdorff, Thomas and Deserno, Thomas M. and Handels, Heinz and Maier, Andreas and Maier-Hein, Klaus H. and Palm, Christoph, Eds. Springer, 2020. pp. 229--229.
| ISBN: | 978-3-658-29267-6 |
| File: | 978-3-658-29267-6_51 |
| Bibtex: | @InProceedings{kuckertz2020BVM,
author={Kuckertz, Sven and Papenberg, Nils and Honegger, Jonas and Morgas, Tomasz and Haas, Benjamin and Heldmann, Stefan},
editor={Tolxdorff, Thomas and Deserno, Thomas M. and Handels, Heinz and Maier, Andreas and Maier-Hein, Klaus H. and Palm, Christoph},
title={Abstract: Deep Learning Based CT-CBCT Image Registration for Adaptive Radio Therapy},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2020},
year={2020},
publisher={Springer},
pages={229--229},
isbn={978-3-658-29267-6},
url={https://doi.org/10.1007/978-3-658-29267-6_51}
} |
Sven
Kuckertz,
Nils
Papenberg,
Jonas
Honegger,
Tomasz
Morgas,
Benjamin
Haas, and
Stefan
Heldmann,
Learning Deformable Image Registration with Structure Guidance Constraints for Adaptive Radiotherapy, in International Workshop on Biomedical Image Registration , 2020. pp. 44--53.
Learning Deformable Image Registration with Structure Guidance Constraints for Adaptive Radiotherapy, in International Workshop on Biomedical Image Registration , 2020. pp. 44--53.
| File: | 10.1007%2F978-3-030-50120-4_5 |
| Bibtex: | @inproceedings{kuckertz2020WBIR,
title={Learning Deformable Image Registration with Structure Guidance Constraints for Adaptive Radiotherapy},
author={Kuckertz, Sven and Papenberg, Nils and Honegger, Jonas and Morgas, Tomasz and Haas, Benjamin and Heldmann, Stefan},
booktitle={International Workshop on Biomedical Image Registration},
pages={44--53},
year={2020},
organization={Springer},
url={http://dx.doi.org/10.1007%2F978-3-030-50120-4_5}
} |
Jiří
Borovec,
Jan
Kybic,
Ignacio
Arganda-Carreras,
Dmitry V.
Sorokin,
Gloria
Bueno,
Alexander V.
Khvostikov,
Spyridon
Bakas,
Eric I-Chao
Chang,
Stefan
Heldmann,
Kimmo
Kartasalo,
Leena
Latonen,
Johannes
Lotz,
Michelle
Noga,
Sarthak
Pati,
Kumaradevan
Punithakumar,
Pekka
Ruusuvuori,
Andrzej
Skalski,
Nazanin
Tahmasebi,
Masi
Valkonen,
Ludovic
Venet,
Yizhe
Wang,
Nick
Weiss,
Marek
Wodzinski,
Yu
Xiang,
Yan
Xu,
Yan
Yan,
Paul
Yushkevich,
Shengyu
Zhao, and
Arrate
Muñoz-Barrutia,
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge, IEEE Transactions on Medical Imaging , vol. 39, no. 10, pp. 3042-3052, 2020. IEEE.
ANHIR: Automatic Non-Rigid Histological Image Registration Challenge, IEEE Transactions on Medical Imaging , vol. 39, no. 10, pp. 3042-3052, 2020. IEEE.
| DOI: | 10.1109/TMI.2020.2986331 |
| File: | tmi.2020.2986331 |
C.
Mercan,
G.C.A.M.
Mooij,
D.
Tellez,
J.
Lotz,
N.
Weiss,
M.
Gerven, and
F.
Ciompi,
Virtual Staining for Mitosis Detection in Breast Histopathology, in 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI) , IEEE, 2020. pp. 1770-1774.
Virtual Staining for Mitosis Detection in Breast Histopathology, in 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI) , IEEE, 2020. pp. 1770-1774.
| DOI: | 10.1109/ISBI45749.2020.9098409 |
| File: | isbi45749.2020.9098409 |
| Bibtex: | @inproceedings{Lotz2020ISBI,
author={Mercan, C. and Mooij, G.C.A.M. and Tellez, D. and Lotz, J. and Weiss, N. and van Gerven, M. and Ciompi, F.},
title={Virtual Staining for Mitosis Detection in Breast Histopathology},
journal={2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI)},
publisher={IEEE}
year={2020},
url={https://doi.org/10.1109/isbi45749.2020.9098409},
} |
Verónica
García-Vázquez,
Florian
Matysiak,
Sonja
Jäckle,
Tim
Eixmann,
Malte Maria
Sieren,
Felix
Haxthausen, and
Floris
Ernst,
Catheter pose-dependent virtual angioscopy images for endovascular aortic repair: validation with a video graphics array (VGA) camera, Current Directions in Biomedical Engineering , vol. 6, no. 1, 2020. De Gruyter.
Catheter pose-dependent virtual angioscopy images for endovascular aortic repair: validation with a video graphics array (VGA) camera, Current Directions in Biomedical Engineering , vol. 6, no. 1, 2020. De Gruyter.
Hari Om
Aggrawal,
Martin S.
Andersen, and
Jan
Modersitzki,
An Image Registration Framework for Discontinuous Mappings Along Cracks, in International Workshop on Biomedical Image Registration , Springer, 2020. pp. 163--173.
An Image Registration Framework for Discontinuous Mappings Along Cracks, in International Workshop on Biomedical Image Registration , Springer, 2020. pp. 163--173.
| DOI: | {{10.1007/978-3-030-50120-4_16}} |
| File: | 978-3-030-50120-4_16}} |
| Bibtex: | @inproceedings{Aggrawal2020WBIR,
author={Aggrawal, Hari Om and Andersen, Martin S. and Modersitzki, Jan},
title={An Image Registration Framework for Discontinuous Mappings Along Cracks},
booktitle={International Workshop on Biomedical Image Registration},
year={2020},
publisher={Springer},
pages={163--173},
url={{{https://doi.org/10.1007/978-3-030-50120-4_16}}},
doi={{{10.1007/978-3-030-50120-4_16}}}
} |
Hari Om
Aggrawal, and
Jan
Modersitzki,
Accelerating the Registration of Image Sequences by Spatio-Temporal Multilevel Strategies, in Proceedings - International Symposium on Biomedical Imaging , IEEE Computer Society, 2020. pp. 683--686.
Accelerating the Registration of Image Sequences by Spatio-Temporal Multilevel Strategies, in Proceedings - International Symposium on Biomedical Imaging , IEEE Computer Society, 2020. pp. 683--686.
| DOI: | {{10.1109/ISBI45749.2020.9098520}} |
| File: | ISBI45749.2020.9098520}} |
| Bibtex: | @inproceedings{Aggrawal2020ISBI,
author={Aggrawal, Hari Om and Modersitzki, Jan},
title={Accelerating the Registration of Image Sequences by Spatio-Temporal Multilevel Strategies},
booktitle={Proceedings - International Symposium on Biomedical Imaging},
year={2020},
publisher={IEEE Computer Society},
pages={683--686},
url={{{https://doi.org/10.1109/ISBI45749.2020.9098520}}},
doi={{{10.1109/ISBI45749.2020.9098520}}}
} |
S.
Parisotto,
J.
Lellmann,
S.
Masnou, and
C.
Schönlieb,
Higher-Order Total Directional Variation: Imaging Applications, SIAM Journal on Imaging Sciences , vol. 13, no. 4, pp. 2063--2104, 2020.
Higher-Order Total Directional Variation: Imaging Applications, SIAM Journal on Imaging Sciences , vol. 13, no. 4, pp. 2063--2104, 2020.
Stephanie
Häger,
Stefan
Heldmann,
Alessa
Hering,
Sven
Kuckertz, and
Annkristin
Lange,
Variable fraunhofer MEVIS RegLib comprehensively applied to Learn2Reg challenge, in International Conference on Medical Image Computing and Computer-Assisted Intervention , 2020. pp. 74--79.
Variable fraunhofer MEVIS RegLib comprehensively applied to Learn2Reg challenge, in International Conference on Medical Image Computing and Computer-Assisted Intervention , 2020. pp. 74--79.
MM
Sieren,
F
Brenne,
A
Hering,
H
Kienapfel,
N
Gebauer,
TH
Oechtering,
A
Fürschke,
F
Wegner,
E
Stahlberg,
S
Heldmann, and
Tanja
Loßau,
Rapid study assessment in follow-up whole-body computed tomography in patients with multiple myeloma using a dedicated bone subtraction software, European radiology , vol. 30, no. 6, pp. 3198—3209, 2020. Springer.
Rapid study assessment in follow-up whole-body computed tomography in patients with multiple myeloma using a dedicated bone subtraction software, European radiology , vol. 30, no. 6, pp. 3198—3209, 2020. Springer.
Bianca
Lassen-Schmidt,
Alessa
Hering,
Stefan
Krass, and
Hans
Meine,
Automatic segmentation of the pulmonary lobes with a 3D u-net and optimized loss function, arXiv preprint arXiv:2006.00083 , 2020.
Automatic segmentation of the pulmonary lobes with a 3D u-net and optimized loss function, arXiv preprint arXiv:2006.00083 , 2020.
Thomas
Vogt,
Roland
Haase,
Danielle
Bednarski, and
Jan
Lellmann,
On the connection between dynamical optimal transport and functional lifting, arXiv preprint arXiv:2007.02587 , 2020.
On the connection between dynamical optimal transport and functional lifting, arXiv preprint arXiv:2007.02587 , 2020.
Thomas
Polzin,
Marc
Niethammer,
François-Xavier
Vialard, and
Jan
Modersitzki,
A discretize—optimize approach for LDDMM registration, in Riemannian Geometric Statistics in Medical Image Analysis , Elsevier, 2020, pp. 479—532.
A discretize—optimize approach for LDDMM registration, in Riemannian Geometric Statistics in Medical Image Analysis , Elsevier, 2020, pp. 479—532.
Yenjung
Chen,
Nilay Yatinkumar
Shah,
Subhra Sundar
Goswami,
Annkristin
Lange,
Felix
Von Haxthausen,
Malte Maria
Sieren,
Jannis
Hagenah,
Floris
Ernst, and
Verónica
Garcia-Vázquez,
Localization of endovascular tools in X-ray images using a motorized C-arm: visualization on HoloLens, in Current Directions in Biomedical Engineering , 2020. pp. 20200029.
Localization of endovascular tools in X-ray images using a motorized C-arm: visualization on HoloLens, in Current Directions in Biomedical Engineering , 2020. pp. 20200029.
2019
Felix
Haxthausen,
Sonja
Jäckle,
Juljan
Bouchagiar,
Florian
Matysiak,
Mark
Kaschwich,
Jan Peter
Goltz,
Erik
Stahlberg,
Markus
Kleemann,
Floris
Ernst, and
Verónica
Garcia-Vázquez,
An augmented reality guidance system for endovascular aortic repair: first steps in reducing radiation exposure, in CARS 2019—Computer Assisted Radiology and Surgery Proceedings of the 33th International Congress and Exhibition , 2019.
An augmented reality guidance system for endovascular aortic repair: first steps in reducing radiation exposure, in CARS 2019—Computer Assisted Radiology and Surgery Proceedings of the 33th International Congress and Exhibition , 2019.
Mark
Kaschwich,
Florian
Matysiak,
Juljan
Bouchagiar,
Marco
Horn,
Verónica
Garcia-Vázquez,
Felix
Haxthausen,
Sonja
Jäckle,
Tim
Eixmann,
Jan Peter
Goltz,
Floris
Ernst, and
others,
Augmented Reality navigierte endovaskuläre Chirurgie—das NavEVAR-Projekt, in 35. Jahrestagung der Deutschen Gesellschaft für Gefäßchirurgie und Gefäßmedizin , 2019.
Augmented Reality navigierte endovaskuläre Chirurgie—das NavEVAR-Projekt, in 35. Jahrestagung der Deutschen Gesellschaft für Gefäßchirurgie und Gefäßmedizin , 2019.
Marco
Horn,
Sonja
Jäckle,
Felix
Haxthausen,
Tim
Eixmann,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann,
Juljan
Bouchagiar,
Florian
Matysiak,
Mark
Kaschwich,
Markus
Kleemann, and
others,
First Steps into Catheter Guidance Including Shape Sensing for Endovascular Aneurysm Repair Procedures, European Journal of Vascular and Endovascular Surgery , vol. 58, no. 6, pp. e610—e611, 2019. Elsevier.
First Steps into Catheter Guidance Including Shape Sensing for Endovascular Aneurysm Repair Procedures, European Journal of Vascular and Endovascular Surgery , vol. 58, no. 6, pp. e610—e611, 2019. Elsevier.
Juljan
Bouchagiar,
Felix
Haxthausen,
Sonja
Jäckle,
Florian
Matysiak,
Mark
Kaschwich,
Jan Peter
Goltz,
Marco
Horn,
Erik
Stahlberg,
Verónica
Garcia-Vázquez,
Floris
Ernst, and
others,
NAV EVAR Auf dem Weg zur strahlungsfreien Stentgraft Implantation, 2019.
NAV EVAR Auf dem Weg zur strahlungsfreien Stentgraft Implantation, 2019.
Marian
Himstedt,
Alexander
Derksen,
Nils
Papenberg,
Jonas
Honegger,
Benjamin
Haas,
Tomasz
Morgas,
Nikola
Cihoric,
Supriya
Chopra,
Akshay
Mangaj, and
Jamema
Swamidas,
Deformable image registration using structure guidance for dose accumulation, in Proceedings of the International Conference on the Use of Computers in Radiation Therapy (ICCR) , 2019.
Deformable image registration using structure guidance for dose accumulation, in Proceedings of the International Conference on the Use of Computers in Radiation Therapy (ICCR) , 2019.
Sonja
Jäckle,
Tim
Eixmann,
Hinnerk
Schulz-Hildebrandt,
Gereon
Hüttmann, and
Torben
Pätz,
Fiber optical shape sensing of flexible instruments for endovascular navigation, International Journal of Computer Assisted Radiology and Surgery , vol. 14, no. 12, pp. 2137--2145, 2019.
Fiber optical shape sensing of flexible instruments for endovascular navigation, International Journal of Computer Assisted Radiology and Surgery , vol. 14, no. 12, pp. 2137--2145, 2019.
| File: | s11548-019-02059-0 |
| Bibtex: | @article{jaeckle2019FOSS,
author={J{\"a}ckle, Sonja and Eixmann, Tim and Schulz-Hildebrandt, Hinnerk and H{\"u}ttmann, Gereon and P{\"a}tz, Torben},
title={Fiber optical shape sensing of flexible instruments for endovascular navigation},
journal={International Journal of Computer Assisted Radiology and Surgery},
year={2019},
volume={14},
number={12},
pages={2137--2145},
keywords = {NavEVAR},
url={https://doi.org/10.1007/s11548-019-02059-0},
} |
Thomas
Vogt, and
Jan
Lellmann,
Functional Liftings of Vectorial Variational Problems with Laplacian Regularization, in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings , Burger, Martin and Lellmann, Jan and Modersitzki, Jan, Eds. Springer International Publishing, 2019. pp. 559--571.
Functional Liftings of Vectorial Variational Problems with Laplacian Regularization, in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings , Burger, Martin and Lellmann, Jan and Modersitzki, Jan, Eds. Springer International Publishing, 2019. pp. 559--571.
| DOI: | 10.1007/978-3-030-22368-7_44 |
| Bibtex: | @inproceedings{VogtLellmann2019,
author={Vogt, Thomas and Lellmann, Jan},
title={Functional Liftings of Vectorial Variational Problems with Laplacian Regularization},
booktitle={Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings},
year={2019},
editor={Burger, Martin and Lellmann, Jan and Modersitzki, Jan},
publisher={Springer International Publishing},
pages={559--571},
url={{{https://arxiv.org/pdf/1904.00898.pdf}}},
doi={{{10.1007/978-3-030-22368-7_44}}}
} |
Kai
Brehmer,
Hari Om
Aggrawal,
Stefan
Heldmann, and
Jan
Modersitzki,
Variational registration of multiple images with the SVD based SqN distance measure, in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings , Burger, Martin and Lellmann, Jan and Modersitzki, Jan, Eds. Springer International Publishing, 2019. pp. 251--262.
Variational registration of multiple images with the SVD based SqN distance measure, in Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings , Burger, Martin and Lellmann, Jan and Modersitzki, Jan, Eds. Springer International Publishing, 2019. pp. 251--262.
| DOI: | 10.1007/978-3-030-22368-7_20 |
| Bibtex: | @inproceedings{Brehmer2019,
author={Brehmer, Kai and Aggrawal, Hari Om and Heldmann, Stefan and Modersitzki, Jan},
title={Variational registration of multiple images with the SVD based SqN distance measure},
booktitle={Scale Space and Variational Methods in Computer Vision: 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30-July 4, 2019, Proceedings},
year={2019},
editor={Burger, Martin and Lellmann, Jan and Modersitzki, Jan},
publisher={Springer International Publishing},
pages={251--262},
url={{{https://arxiv.org/abs/1907.09732}}},
doi={{{10.1007/978-3-030-22368-7_20}}}
} |
Benjamin Wacker,
Two variants of magnetic diffusivity stabilized finite element methods for the magnetic induction equation, Mathematical Methods in the Applied Sciences , 2019. Wiley Online Library.
Two variants of magnetic diffusivity stabilized finite element methods for the magnetic induction equation, Mathematical Methods in the Applied Sciences , 2019. Wiley Online Library.
Thomas
Vogt,
Evgeny
Strekalovskiy,
Daniel
Cremers, and
Jan
Lellmann,
Lifting methods for manifold-valued variational problems, in Variational Methods for Nonlinear Geometric Data and Applications , Grohs, Philipp and Holler, Martin and Weinmann, Andreas, Eds. Springer International Publishing, 2019, pp. In press.
Lifting methods for manifold-valued variational problems, in Variational Methods for Nonlinear Geometric Data and Applications , Grohs, Philipp and Holler, Martin and Weinmann, Andreas, Eds. Springer International Publishing, 2019, pp. In press.
| DOI: | 10.1007/978-3-030-31351-7_3 |
| Bibtex: | @incollection{VogtEtAl2019,
author={Vogt, Thomas and Strekalovskiy, Evgeny and Cremers, Daniel and Lellmann, Jan},
title={Lifting methods for manifold-valued variational problems},
series={Springer Handbooks},
booktitle={Variational Methods for Nonlinear Geometric Data and Applications},
editor={Grohs, Philipp and Holler, Martin and Weinmann, Andreas},
publisher={Springer International Publishing},
pages={In press},
year={2019},
url={{{https://arxiv.org/pdf/1908.03776.pdf}}},
doi={{{10.1007/tba}}}
} |
Felix
Haxthausen,
Sonja
Jäckle,
Jan
Strehlow,
Floris
Ernst, and
Veronica
García-Vazquez,
Catheter pose-dependent virtual angioscopy images visualized on augmented reality glasses, 2019. pp. 289-291.
Catheter pose-dependent virtual angioscopy images visualized on augmented reality glasses, 2019. pp. 289-291.
| File: | cdbme-2019-0073.xml |
| Bibtex: | @INPROCEEDINGS{vonHaxthausen2019,
author = {von Haxthausen, Felix and J{\"{a}}ckle, Sonja and Strehlow, Jan and Ernst, Floris and Garc{\'i}a-V{\'a}zquez, Ver{\'o}nica},
title = {Catheter pose-dependent virtual angioscopy images visualized on augmented reality glasses},
journal = {Current Directions in Biomedical Engineering},
volume = {5},
number = {1},
year = {2019},
keywords = {NavEVAR},
pages = {289-291},
url={https://www.degruyter.com/view/j/cdbme.2019.5.issue-1/cdbme-2019-0073/cdbme-2019-0073.xml}
} |
Valentin
Kraft,
Jan
Strehlow,
Sonja
Jäckle,
Veronica
García-Vazquez,
Florian
Link,
Felix
Haxthausen,
Andrea
Schenk, and
Christian
Schumann,
A comparison of streaming methods for the Microsoft HoloLens, in Tagungsgband der 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie (CURAC) , Oliver Burgert, Hochschule Reutlingen, Bernhard Hirt, Universität Tübingen, Sep.2019. pp. 212-216.
A comparison of streaming methods for the Microsoft HoloLens, in Tagungsgband der 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie (CURAC) , Oliver Burgert, Hochschule Reutlingen, Bernhard Hirt, Universität Tübingen, Sep.2019. pp. 212-216.
Sonja
Jäckle,
Jan
Strehlow, and
Stefan
Heldmann,
Shape Sensing with Fiber Bragg Grating Sensors, in Bildverarbeitung für die Medizin 2019 , Springer, 2019, pp. 258--263.
Shape Sensing with Fiber Bragg Grating Sensors, in Bildverarbeitung für die Medizin 2019 , Springer, 2019, pp. 258--263.
| File: | 10.1007%2F978-3-658-25326-4_58 |
| Bibtex: | @incollection{jaeckle2019shape,
title={Shape Sensing with Fiber Bragg Grating Sensors},
author={J{\"a}ckle, Sonja and Strehlow, Jan and Heldmann, Stefan},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2019},
pages={258--263},
year={2019},
publisher={Springer},
keywords = {NavEVAR},
url={https://link.springer.com/chapter/10.1007%2F978-3-658-25326-4_58},
} |
J.
Lellmann,
M.
Burger, and
J. (eds.)
Modersitzki,
Proceedings of the 7th International Conference On Scale Space and Variational Methods in Computer Vision (SSVM 2019)., .... Springer, 2019.
Proceedings of the 7th International Conference On Scale Space and Variational Methods in Computer Vision (SSVM 2019)., .... Springer, 2019.
Daniel
Budelmann,
Lars
König,
Nils
Papenberg, and
Jan
Lellmann,
Fully-Deformable 3D Image Registration in Two Seconds, in Bildverarbeitung für die Medizin 2019 , Handels, Heinz and Deserno, Thomas M. and Maier, Andreas and Maier-Hein, Klaus Hermann and Palm, Christoph and Tolxdorff, Thomas, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2019. pp. 302--307.
Fully-Deformable 3D Image Registration in Two Seconds, in Bildverarbeitung für die Medizin 2019 , Handels, Heinz and Deserno, Thomas M. and Maier, Andreas and Maier-Hein, Klaus Hermann and Palm, Christoph and Tolxdorff, Thomas, Eds. Wiesbaden: Springer Fachmedien Wiesbaden, 2019. pp. 302--307.
Oliver
Klein,
Frederic
Kanter,
Hagen
Kulbe,
Paul
Jank,
Carsten
Denkert,
Grit
Nebrich,
Wolfgang D.
Schmitt,
Zhiyang
Wu,
Catarina A.
Kunze,
Jalid
Sehouli,
Silvia
Darb-Esfahani,
Ioana
Braicu,
Jan
Lellmann,
Herbert
Thiele, and
Eliane T.
Taube,
MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods, PROTEOMICS – Clinical Applications , vol. 13, no. 1, pp. 1700181, 2019.
MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods, PROTEOMICS – Clinical Applications , vol. 13, no. 1, pp. 1700181, 2019.
| DOI: | 10.1002/prca.201700181 |
| File: | prca.201700181 |
| Bibtex: | @article{OliverEtAl2019,
author = {Klein, Oliver and Kanter, Frederic and Kulbe, Hagen and Jank, Paul and Denkert, Carsten and Nebrich, Grit and Schmitt, Wolfgang D. and Wu, Zhiyang and Kunze, Catarina A. and Sehouli, Jalid and Darb-Esfahani, Silvia and Braicu, Ioana and Lellmann, Jan and Thiele, Herbert and Taube, Eliane T.},
title = {MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods},
journal = {PROTEOMICS – Clinical Applications},
volume = {13},
number = {1},
pages = {1700181},
doi = {10.1002/prca.201700181},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/prca.201700181},
eprint = {https://onlinelibrary.wiley.com/doi/pdf/10.1002/prca.201700181},
abstract = {Purpose Precise histological classification of epithelial ovarian cancer (EOC) has immanent diagnostic and therapeutic consequences, but remains challenging in histological routine. The aim of this pilot study is to examine the potential of matrix-assisted laser desorption/ionization (MALDI) imaging mass spectrometry in combination with machine learning methods to classify EOC histological subtypes from tissue microarray. Experimental design Formalin-fixed-paraffin-embedded tissue of 20 patients with ovarian clear-cell, 14 low-grade serous, 19 high-grade serous ovarian carcinomas, and 14 serous borderline tumors are analyzed using MALDI-Imaging. Classifications are computed by linear discriminant analysis (LDA), support vector machines with linear (SVM-lin) and radial basis function kernels (SVM-rbf), a neural network (NN), and a convolutional neural network (CNN). Results MALDI-Imaging and machine learning methods result in classification of EOC histotypes with mean accuracy of 80\% for LDA, 80\% SVM-lin, 74\% SVM-rbf, 83\% NN, and 85\% CNN. Based on sensitivity (69–100\%) and specificity (90–99\%), CCN and NN are most suited to EOC classification. Conclusion and clinical relevance The pilot study demonstrates the potential of MALDI-Imaging derived proteomic classifiers in combination with machine learning algorithms to discriminate EOC histotypes. Applications may support the development of new prognostic parameters in the assessment of EOC.},
year = {2019}
}
|
Alessa
Hering,
Sven
Kuckertz,
Stefan
Heldmann, and
Mattias P
Heinrich,
Memory-efficient 2.5 D convolutional transformer networks for multi-modal deformable registration with weak label supervision applied to whole-heart CT and MRI scans, International journal of computer assisted radiology and surgery , vol. 14, no. 11, pp. 1901--1912, 2019. Springer.
Memory-efficient 2.5 D convolutional transformer networks for multi-modal deformable registration with weak label supervision applied to whole-heart CT and MRI scans, International journal of computer assisted radiology and surgery , vol. 14, no. 11, pp. 1901--1912, 2019. Springer.
| File: | s11548-019-02068-z |
| Bibtex: | @article{hering2019memory,
title={Memory-efficient 2.5 D convolutional transformer networks for multi-modal deformable registration with weak label supervision applied to whole-heart CT and MRI scans},
author={Hering, Alessa and Kuckertz, Sven and Heldmann, Stefan and Heinrich, Mattias P},
journal={International journal of computer assisted radiology and surgery},
volume={14},
number={11},
pages={1901--1912},
year={2019},
publisher={Springer}
} |
Alessa
Hering,
Sven
Kuckertz,
Stefan
Heldmann, and
Mattias P
Heinrich,
Enhancing label-driven deep deformable image registration with local distance metrics for state-of-the-art cardiac motion tracking, in Bildverarbeitung für die Medizin 2019 , Springer, 2019, pp. 309--314.
Enhancing label-driven deep deformable image registration with local distance metrics for state-of-the-art cardiac motion tracking, in Bildverarbeitung für die Medizin 2019 , Springer, 2019, pp. 309--314.
| File: | 10.1007%2F978-3-658-25326-4_69 |
| Bibtex: | @incollection{hering2019BVM,
title={Enhancing label-driven deep deformable image registration with local distance metrics for state-of-the-art cardiac motion tracking},
author={Hering, Alessa and Kuckertz, Sven and Heldmann, Stefan and Heinrich, Mattias P},
booktitle={Bildverarbeitung f{\"u}r die Medizin 2019},
pages={309--314},
year={2019},
publisher={Springer},
url={http://dx.doi.org/10.1007%2F978-3-658-25326-4_69},
} |
Alessa
Hering, and
Stefan
Heldmann,
Unsupervised learning for large motion thoracic CT follow-up registration, in Medical Imaging 2019: Image Processing , SPIE, 2019. pp. 1-7.
Unsupervised learning for large motion thoracic CT follow-up registration, in Medical Imaging 2019: Image Processing , SPIE, 2019. pp. 1-7.
| DOI: | 10.1117/12.2506962 |
| File: | 12.2506962 |
| Bibtex: | @inproceedings{hering2019SPIE,
author = {Hering, Alessa and Heldmann, Stefan},
title = {{Unsupervised learning for large motion thoracic CT follow-up registration}},
volume = {10949},
booktitle = {Medical Imaging 2019: Image Processing},
organization = {International Society for Optics and Photonics},
publisher = {SPIE},
pages = {1-7},
year = {2019},
doi = {10.1117/12.2506962},
URL = {https://doi.org/10.1117/12.2506962}
} |
Hans
Meine, and
Alessa
Hering,
Efficient Prealignment of CT Scans for Registration through a Bodypart Regressor, in Proceedings of Medical Imaging with Deep Learning (MIDL 2019) , 2019. pp. 1-4.
Efficient Prealignment of CT Scans for Registration through a Bodypart Regressor, in Proceedings of Medical Imaging with Deep Learning (MIDL 2019) , 2019. pp. 1-4.
Alessa
Hering,
Bram
Ginneken, and
Stefan
Heldmann,
mlVIRNET: Multilevel Variational Image Registration Network, in Proceeding of Medical Image Computing and Computer Assisted Intervention (MICCAI 2019) , Springer, 2019. pp. 257-265.
mlVIRNET: Multilevel Variational Image Registration Network, in Proceeding of Medical Image Computing and Computer Assisted Intervention (MICCAI 2019) , Springer, 2019. pp. 257-265.
| DOI: | 10.1007/978-3-030-32226-7_29 |
| File: | 978-3-030-32226-7_29 |
| Bibtex: | @inproceedings{hering2019MICCAI,
author = {Hering, Alessa and van Ginneken, Bram and Heldmann, Stefan},
title = {{mlVIRNET: Multilevel Variational Image Registration Network}},
volume = {11769},
booktitle = {Proceeding of Medical Image Computing and Computer Assisted Intervention (MICCAI 2019)},
publisher = {Springer},
pages = {257-265},
year = {2019},
doi = {10.1007/978-3-030-32226-7_29},
URL = {https://doi.org/10.1007/978-3-030-32226-7_29}
} |
Wouter
Bulten,
Péter
Bándi,
Jeffrey
Hoven,
Rob
Loo,
Johannes
Lotz,
Nick
Weiss,
Jeroen
Laak,
Bram
Ginneken,
Christina
Kaa, and
Geert
Litjens,
Epithelium segmentation using deep learning in H&E-stained prostate specimens with immunohistochemistry as reference standard, Scientific Reports , vol. 9, 2019.
Epithelium segmentation using deep learning in H&E-stained prostate specimens with immunohistochemistry as reference standard, Scientific Reports , vol. 9, 2019.
| File: | s41598-018-37257-4 |
| Bibtex: | @article{Lotz2019,
author={Bulten, Wouter and Bándi, Péter and Hoven, Jeffrey and van de Loo, Rob and Lotz, Johannes and Weiss, Nick and van der Laak, Jeroen and van Ginneken, Bram and Hulsbergen-van de Kaa, Christina and Litjens, Geert },
title={Epithelium segmentation using deep learning in H&E-stained prostate specimens with immunohistochemistry as reference standard},
journal={Scientific Reports},
year={2019},
volume={9},
article={864},
url={https://doi.org/10.1038/s41598-018-37257-4},
} |
Jan
Lellmann,
Sebastian
Neumayer,
Max
Nimmer, and
Gabriele
Steidl,
Methods for finding the offset in robust subspace fitting, PAMM , vol. 19, no. 1, pp. e201900323, 2019. Wiley Online Library.
Methods for finding the offset in robust subspace fitting, PAMM , vol. 19, no. 1, pp. e201900323, 2019. Wiley Online Library.
| DOI: | 10.1002/pamm.201900323 |
| Bibtex: | @article{lellmann2019methods,
title={Methods for finding the offset in robust subspace fitting},
author={Lellmann, Jan and Neumayer, Sebastian and Nimmer, Max and Steidl, Gabriele},
journal={PAMM},
volume={19},
number={1},
pages={e201900323},
year={2019},
publisher={Wiley Online Library}
}
|
Oliver
Klein,
Frederic
Kanter,
Hagen
Kulbe,
Paul
Jank,
Carsten
Denkert,
Grit
Nebrich,
Wolfgang D
Schmitt,
Zhiyang
Wu,
Catarina A
Kunze,
Jalid
Sehouli, and
others,
Front Cover: MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods, PROTEOMICS—Clinical Applications , vol. 13, no. 1, pp. 1970011, 2019. Wiley Online Library.
Front Cover: MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods, PROTEOMICS—Clinical Applications , vol. 13, no. 1, pp. 1970011, 2019. Wiley Online Library.
| DOI: | 10.1002/prca.201970011 |
| Bibtex: | @article{klein2019front,
title={Front Cover: MALDI-Imaging for Classification of Epithelial Ovarian Cancer Histotypes from a Tissue Microarray Using Machine Learning Methods},
author={Klein, Oliver and Kanter, Frederic and Kulbe, Hagen and Jank, Paul and Denkert, Carsten and Nebrich, Grit and Schmitt, Wolfgang D and Wu, Zhiyang and Kunze, Catarina A and Sehouli, Jalid and others},
journal={PROTEOMICS--Clinical Applications},
volume={13},
number={1},
pages={1970011},
year={2019},
publisher={Wiley Online Library}
}
|
Hans
Meine, and
Alessa
Hering,
Efficient Prealignment of CT Scans for Registration through a Bodypart Regressor, arXiv preprint arXiv:1909.08898 , 2019.
Efficient Prealignment of CT Scans for Registration through a Bodypart Regressor, arXiv preprint arXiv:1909.08898 , 2019.
Ke
Chen,
Lok Ming
Lui, and
Jan
Modersitzki,
Chapter 15 - Image and surface registration, in Processing, Analyzing and Learning of Images, Shapes, and Forms: Part 2 , Ron Kimmel and Xue-Cheng Tai, Eds. Elsevier, 2019, pp. 579-611.
Chapter 15 - Image and surface registration, in Processing, Analyzing and Learning of Images, Shapes, and Forms: Part 2 , Ron Kimmel and Xue-Cheng Tai, Eds. Elsevier, 2019, pp. 579-611.
| DOI: | https://doi.org/10.1016/bs.hna.2019.07.001 |
| File: | S1570865919300146 |
| Bibtex: | @incollection{CHEN2019579,
title = {Chapter 15 - Image and surface registration},
editor = {Ron Kimmel and Xue-Cheng Tai},
series = {Handbook of Numerical Analysis},
publisher = {Elsevier},
volume = {20},
pages = {579-611},
year = {2019},
booktitle = {Processing, Analyzing and Learning of Images, Shapes, and Forms: Part 2},
issn = {1570-8659},
doi = {https://doi.org/10.1016/bs.hna.2019.07.001},
url = {https://www.sciencedirect.com/science/article/pii/S1570865919300146},
author = {Ke Chen and Lok Ming Lui and Jan Modersitzki},
keywords = {Image registration, Surface registration, Variational models, 35A15, 37E30, 49J40, 49Q05, 62H35, 62M40, 65D18, 80M30} |
Dagmar
Grob,
Luuk
Oostveen,
Jan
Rühaak,
Stefan
Heldmann,
Brian
Mohr,
Koen
Michielsen,
Sabrina
Dorn,
Mathias
Prokop,
Marc
Kachelrieß,
Monique
Brink, and
Tanja
Loßau,
Accuracy of registration algorithms in subtraction CT of the lungs: A digital phantom study, Medical physics , vol. 46, no. 5, pp. 2264—2274, 2019. Wiley Online Library.
Accuracy of registration algorithms in subtraction CT of the lungs: A digital phantom study, Medical physics , vol. 46, no. 5, pp. 2264—2274, 2019. Wiley Online Library.
Johannes
Lotz,
Nick
Weiss, and
Stefan
Heldmann,
Robust, fast and accurate: a 3-step method for automatic histological image registration, arXiv preprint arXiv:1903.12063 , 2019.
Robust, fast and accurate: a 3-step method for automatic histological image registration, arXiv preprint arXiv:1903.12063 , 2019.
2018
Kai
Brehmer,
Benjamin
Wacker, and
Jan
Modersitzki,
A Novel Similarity Measure for Image Sequences, in International Workshop on Biomedical Image Registration , 2018. pp. 47--56.
A Novel Similarity Measure for Image Sequences, in International Workshop on Biomedical Image Registration , 2018. pp. 47--56.
| DOI: | 10.1007/978-3-319-92258-4_5 |
| File: | 1907.09741}} |
| Bibtex: | @inproceedings{brehmer2018novel,
title={A Novel Similarity Measure for Image Sequences},
author={Brehmer, Kai and Wacker, Benjamin and Modersitzki, Jan},
booktitle={International Workshop on Biomedical Image Registration},
pages={47--56},
year={2018},
organization={Springer},
url={{{https://arxiv.org/abs/1907.09741}}},
doi={{{10.1007/978-3-319-92258-4_5}}}
} |
Lars König,
Matrix-free approaches for deformable image registration with large-scale and real-time applications in medical imaging, Institute of Mathematics and Image Computing, University of Lübeck, 2018.
Matrix-free approaches for deformable image registration with large-scale and real-time applications in medical imaging, Institute of Mathematics and Image Computing, University of Lübeck, 2018.
| File: | |
| Bibtex: | @phdthesis{2018-PhD-Konig,
Author = {Lars König},
Title = {Matrix-free approaches for deformable image registration with large-scale and real-time applications in medical imaging},
School = {Institute of Mathematics and Image Computing, University of L\"ubeck},
Year = {2018},
} |
Veronica
García-Vazquez,
Felix
Haxthausen,
Sonja
Jäckle,
Christian
Schumann,
Ivo
Kuhlemann,
Juljan
Bouchagiar,
Anna-Catharina
Höfer,
Florian
Matysiak,
Gereon
Hüttmann,
Jan Peter
Goltz, and
Tanja
Loßau,
Navigation and visualisation with HoloLens in endovascular aortic repair, Innovative Surgical Sciences , vol. 3, no. 3, pp. 167--177, 2018. De Gruyter.
Navigation and visualisation with HoloLens in endovascular aortic repair, Innovative Surgical Sciences , vol. 3, no. 3, pp. 167--177, 2018. De Gruyter.
| File: | |
| Bibtex: | @article{garcia2018navigation,
title={Navigation and visualisation with HoloLens in endovascular aortic repair},
author={Garc{\'i}a-V{\'a}zquez, Ver{\'o}nica and von Haxthausen, Felix and J{\"a}ckle, Sonja and Schumann, Christian and Kuhlemann, Ivo and Bouchagiar, Juljan and H{\"o}fer, Anna-Catharina and Matysiak, Florian and H{\"u}ttmann, Gereon and Goltz, Jan Peter and others},
journal={Innovative Surgical Sciences},
volume={3},
number={3},
pages={167--177},
year={2018},
publisher={De Gruyter},
keywords={NavEVAR},
url={https://degruyter.com/downloadpdf/j/iss.2018.3.issue-3/iss-2018-2001/iss-2018-2001.pdf}
} |
Sonja
Jäckle, and
Stefan
Heldmann,
Rigid Lens - Locally Rigid Approximations of Deformable Registration for Change Assessment in Thorax-Abdomen CT Follow-Up Scans, in Image Analysis for Moving Organ, Breast, and Thoracic Images , Springer, 2018, pp. 272--283.
Rigid Lens - Locally Rigid Approximations of Deformable Registration for Change Assessment in Thorax-Abdomen CT Follow-Up Scans, in Image Analysis for Moving Organ, Breast, and Thoracic Images , Springer, 2018, pp. 272--283.
| File: | 978-3-030-00946-5_27 |
| Bibtex: | @incollection{jaeckle2018rigid,
title={Rigid Lens--Locally Rigid Approximations of Deformable Registration for Change Assessment in Thorax-Abdomen CT Follow-Up Scans},
author={J{\"a}ckle, Sonja and Heldmann, Stefan},
booktitle={Image Analysis for Moving Organ, Breast, and Thoracic Images},
pages={272--283},
year={2018},
publisher={Springer},
url={https://link.springer.com/chapter/10.1007/978-3-030-00946-5_27},
} |

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